Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 66 entries in the algebraic variable array.
There are a total of 42 entries in each of the rate and state variable arrays.
There are a total of 94 entries in the constant variable array.
*/
/*
* VOI is time in component environment (second).
* STATES[0] is Casp8 in component Casp8 (micromolar).
* STATES[1] is Casp8Bid in component Casp8 (micromolar).
* STATES[2] is FeLnNO in component FeLn (micromolar).
* STATES[3] is Bid in component Bid (micromolar).
* ALGEBRAIC[2] is J_0 in component Casp8 (flux).
* ALGEBRAIC[0] is J_f0 in component Casp8 (flux).
* ALGEBRAIC[1] is J_Casp8 in component Casp8 (flux).
* ALGEBRAIC[3] is r_20NO in component Casp8 (flux).
* ALGEBRAIC[65] is r_19NO in component PTPC (flux).
* CONSTANTS[0] is k_f0 in component model_constant (first_order_rate_constant).
* CONSTANTS[1] is k_10 in component model_constant (second_order_rate_constant).
* CONSTANTS[2] is k_00 in component model_constant (first_order_rate_constant).
* CONSTANTS[3] is u in component model_constant (first_order_rate_constant).
* CONSTANTS[4] is k_20NO in component model_constant (second_order_rate_constant).
* STATES[4] is Apaf_1 in component Apaf_1 (micromolar).
* STATES[5] is CytcApaf_1 in component CytcApaf_1 (micromolar).
* STATES[6] is Cytc in component Cytc (micromolar).
* ALGEBRAIC[4] is J_Apaf_1 in component Apaf_1 (flux).
* ALGEBRAIC[5] is J_1 in component Apaf_1 (flux).
* CONSTANTS[5] is P_Apaf_1 in component model_constant (flux).
* CONSTANTS[6] is k_11 in component model_constant (second_order_rate_constant).
* CONSTANTS[7] is k_01 in component model_constant (first_order_rate_constant).
* STATES[7] is Apop in component Apop (micromolar).
* ALGEBRAIC[6] is J_1b in component CytcApaf_1 (flux).
* CONSTANTS[8] is k_11b in component model_constant (rate).
* CONSTANTS[9] is k_01b in component model_constant (first_order_rate_constant).
* CONSTANTS[10] is p in component model_constant (dimensionless).
* STATES[8] is Cytc_mito in component Cytc_mito (micromolar).
* STATES[9] is PTPC in component PTPC (micromolar).
* ALGEBRAIC[8] is PTPC_act in component Cytc (micromolar).
* CONSTANTS[11] is PTPC_0 in component model_constant (micromolar).
* ALGEBRAIC[10] is J_14 in component Cytc_mito (flux).
* ALGEBRAIC[7] is J_Cytc in component Cytc (flux).
* CONSTANTS[12] is k_1 in component model_constant (second_order_rate_constant).
* STATES[10] is Bax_2 in component Bax_2 (micromolar).
* ALGEBRAIC[9] is J_Cytc_mito in component Cytc_mito (flux).
* CONSTANTS[13] is P_Cytc_mito in component model_constant (flux).
* CONSTANTS[14] is k14 in component model_constant (second_order_rate_constant).
* ALGEBRAIC[17] is J_12b in component tBidBax (flux).
* ALGEBRAIC[11] is J_Bax_2 in component Bax_2 (flux).
* STATES[11] is tBid_mito in component tBid_mito (micromolar).
* STATES[12] is Bax in component Bax (micromolar).
* ALGEBRAIC[14] is J_11 in component tBid (flux).
* ALGEBRAIC[13] is J_12a in component tBid_mito (flux).
* ALGEBRAIC[12] is J_tBid_mito in component tBid_mito (flux).
* CONSTANTS[15] is k12a in component model_constant (second_order_rate_constant).
* STATES[13] is tBid in component tBid (micromolar).
* ALGEBRAIC[24] is J_f8 in component Casp3Bid (flux).
* ALGEBRAIC[15] is J_tBid in component tBid (flux).
* CONSTANTS[16] is k11 in component model_constant (first_order_rate_constant).
* STATES[14] is tBidBax in component tBidBax (micromolar).
* ALGEBRAIC[16] is J_tBidBax in component tBidBax (flux).
* CONSTANTS[17] is k12b in component model_constant (second_order_rate_constant).
* STATES[15] is Bcl_2 in component Bcl_2 (micromolar).
* ALGEBRAIC[19] is J_13 in component Bax (flux).
* ALGEBRAIC[18] is J_Bax in component Bax (flux).
* CONSTANTS[91] is P_Bax in component Bax (flux).
* CONSTANTS[18] is k13 in component model_constant (second_order_rate_constant).
* CONSTANTS[19] is P_oBax in component model_constant (flux).
* CONSTANTS[20] is p53 in component model_constant (micromolar).
* CONSTANTS[21] is p53_thresh in component model_constant (micromolar).
* CONSTANTS[22] is u_Bax in component model_constant (first_order_rate_constant).
* STATES[16] is Casp3 in component Casp3 (micromolar).
* STATES[17] is Casp3Bcl_2 in component Casp3Bcl_2 (micromolar).
* ALGEBRAIC[20] is J_9 in component Bcl_2 (flux).
* ALGEBRAIC[21] is J_Bcl_2 in component Bcl_2 (flux).
* CONSTANTS[23] is k_19 in component model_constant (second_order_rate_constant).
* CONSTANTS[24] is k_09 in component model_constant (first_order_rate_constant).
* CONSTANTS[92] is P_Bcl_2 in component Bcl_2 (flux).
* CONSTANTS[25] is P_oBcl_2 in component model_constant (flux).
* CONSTANTS[26] is u_Bcl_2 in component model_constant (first_order_rate_constant).
* ALGEBRAIC[22] is J_f9 in component Casp3Bcl_2 (flux).
* CONSTANTS[27] is k_f9 in component model_constant (first_order_rate_constant).
* STATES[18] is Casp3Bid in component Casp3Bid (micromolar).
* ALGEBRAIC[23] is J_8 in component Casp3Bid (flux).
* CONSTANTS[28] is k_18 in component model_constant (second_order_rate_constant).
* CONSTANTS[29] is k_08 in component model_constant (first_order_rate_constant).
* CONSTANTS[30] is k_f8 in component model_constant (first_order_rate_constant).
* ALGEBRAIC[25] is J_Bid in component Bid (flux).
* CONSTANTS[31] is P_Bid in component model_constant (flux).
* STATES[19] is IAP in component IAP (micromolar).
* STATES[20] is Casp3IAP in component Casp3 (micromolar).
* ALGEBRAIC[34] is J_f6 in component Casp9Pro3 (flux).
* ALGEBRAIC[33] is J_f6b in component ApopCasp9_2Pro3 (flux).
* ALGEBRAIC[27] is J_7 in component Casp3 (flux).
* ALGEBRAIC[26] is J_Casp3 in component Casp3 (flux).
* ALGEBRAIC[64] is r_22NO in component FeLn (flux).
* CONSTANTS[32] is k_17 in component model_constant (second_order_rate_constant).
* CONSTANTS[33] is k_07 in component model_constant (first_order_rate_constant).
* ALGEBRAIC[29] is J_2 in component Pro9 (flux).
* ALGEBRAIC[42] is J_4b in component ApopCasp9 (flux).
* STATES[21] is Pro9 in component Pro9 (micromolar).
* STATES[22] is ApopPro9 in component Pro9 (micromolar).
* STATES[23] is ApopPro9_2 in component ApopPro9_2 (micromolar).
* ALGEBRAIC[30] is J_3 in component Pro9 (flux).
* ALGEBRAIC[28] is J_Pro9 in component Pro9 (flux).
* CONSTANTS[34] is k_12 in component model_constant (second_order_rate_constant).
* CONSTANTS[35] is k_02 in component model_constant (first_order_rate_constant).
* CONSTANTS[36] is k_13 in component model_constant (second_order_rate_constant).
* CONSTANTS[37] is k_03 in component model_constant (first_order_rate_constant).
* CONSTANTS[38] is P_Pro9 in component model_constant (flux).
* ALGEBRAIC[31] is J_f3 in component ApopPro9_2 (flux).
* CONSTANTS[39] is k_f3 in component model_constant (first_order_rate_constant).
* STATES[24] is ApopCasp9_2Pro3 in component ApopCasp9_2Pro3 (micromolar).
* STATES[25] is ApopCasp9_2 in component ApopCasp9_2 (micromolar).
* STATES[26] is Pro3 in component Pro3 (micromolar).
* ALGEBRAIC[32] is J_6b in component ApopCasp9_2Pro3 (flux).
* CONSTANTS[40] is k_16b in component model_constant (second_order_rate_constant).
* CONSTANTS[41] is k_06b in component model_constant (first_order_rate_constant).
* CONSTANTS[42] is k_f6b in component model_constant (first_order_rate_constant).
* STATES[27] is Casp9Pro3 in component Casp9Pro3 (micromolar).
* ALGEBRAIC[35] is J_6 in component Pro3 (flux).
* CONSTANTS[43] is k_f6 in component model_constant (first_order_rate_constant).
* STATES[28] is Casp9 in component Casp9 (micromolar).
* ALGEBRAIC[36] is J_Pro3 in component Pro3 (flux).
* CONSTANTS[44] is k_16 in component model_constant (second_order_rate_constant).
* CONSTANTS[45] is k_06 in component model_constant (first_order_rate_constant).
* CONSTANTS[46] is P_Pro3 in component model_constant (flux).
* STATES[29] is Casp9IAP in component IAP (micromolar).
* STATES[30] is ApopCasp9IAP in component IAP (micromolar).
* STATES[31] is ApopCasp9_2IAP in component IAP (micromolar).
* STATES[32] is ApopCasp9 in component ApopCasp9 (micromolar).
* ALGEBRAIC[37] is J_5 in component IAP (flux).
* ALGEBRAIC[38] is J_5b in component IAP (flux).
* ALGEBRAIC[39] is J_5c in component IAP (flux).
* ALGEBRAIC[40] is J_IAP in component IAP (flux).
* CONSTANTS[47] is P_IAP in component model_constant (flux).
* CONSTANTS[48] is k_15 in component model_constant (second_order_rate_constant).
* CONSTANTS[49] is k_05 in component model_constant (first_order_rate_constant).
* CONSTANTS[50] is k_15b in component model_constant (second_order_rate_constant).
* CONSTANTS[51] is k_05b in component model_constant (first_order_rate_constant).
* CONSTANTS[52] is k_15c in component model_constant (second_order_rate_constant).
* CONSTANTS[53] is k_05c in component model_constant (first_order_rate_constant).
* ALGEBRAIC[41] is J_4 in component ApopCasp9 (flux).
* CONSTANTS[54] is k_14 in component model_constant (first_order_rate_constant).
* CONSTANTS[55] is k_04 in component model_constant (second_order_rate_constant).
* CONSTANTS[56] is k_14b in component model_constant (first_order_rate_constant).
* CONSTANTS[57] is k_04b in component model_constant (second_order_rate_constant).
* ALGEBRAIC[43] is J_Casp9 in component Casp9 (flux).
* ALGEBRAIC[63] is r_21NO in component FeLn (flux).
* STATES[33] is NO in component NO (micromolar).
* STATES[34] is O_2m in component O_2m (micromolar).
* CONSTANTS[58] is O_2 in component NO (micromolar).
* STATES[35] is NO_2 in component NO (micromolar).
* STATES[36] is N2O3 in component N2O3 (micromolar).
* STATES[37] is GSNO in component GSNO (micromolar).
* STATES[38] is CcOX in component NO (micromolar).
* STATES[39] is FeLn in component FeLn (micromolar).
* CONSTANTS[90] is r_1NO in component NO (flux).
* ALGEBRAIC[44] is r_4NO in component NO (flux).
* ALGEBRAIC[45] is r_12aNO in component NO (flux).
* ALGEBRAIC[46] is r_12bNOp in component NO (flux).
* ALGEBRAIC[47] is r_12bNOm in component NO (flux).
* ALGEBRAIC[48] is r_14NO in component NO (flux).
* ALGEBRAIC[49] is r_15NO in component NO (flux).
* ALGEBRAIC[50] is r_16NO in component NO (flux).
* CONSTANTS[59] is k_1NO in component model_constant (flux).
* CONSTANTS[60] is k_4NO in component model_constant (second_order_rate_constant).
* CONSTANTS[61] is k_12aNO in component model_constant (rate2).
* CONSTANTS[62] is k_12bNOp in component model_constant (second_order_rate_constant).
* CONSTANTS[63] is k_12bNOm in component model_constant (first_order_rate_constant).
* CONSTANTS[64] is k_14NO in component model_constant (first_order_rate_constant).
* CONSTANTS[65] is k_15NO in component model_constant (second_order_rate_constant).
* CONSTANTS[66] is k_16NO in component model_constant (second_order_rate_constant).
* CONSTANTS[67] is SOD in component O_2m (micromolar).
* CONSTANTS[93] is r_2NO in component O_2m (flux).
* ALGEBRAIC[51] is r_5NO in component O_2m (flux).
* ALGEBRAIC[52] is r_10NO in component O_2m (flux).
* CONSTANTS[68] is k_2NO in component model_constant (flux).
* CONSTANTS[69] is k_5NO in component model_constant (second_order_rate_constant).
* CONSTANTS[70] is k_10NO in component model_constant (rate2).
* STATES[40] is ONOO_m in component ONOO_m (micromolar).
* STATES[41] is GSH in component GSH (micromolar).
* CONSTANTS[71] is GPX in component ONOO_m (micromolar).
* CONSTANTS[72] is CO_2 in component ONOO_m (micromolar).
* CONSTANTS[73] is Cyt_c in component ONOO_m (micromolar).
* ALGEBRAIC[53] is r_6NO in component ONOO_m (flux).
* ALGEBRAIC[54] is r_7NO in component ONOO_m (flux).
* ALGEBRAIC[55] is r_8NO in component ONOO_m (flux).
* ALGEBRAIC[56] is r_9NO in component ONOO_m (flux).
* ALGEBRAIC[57] is r_18NO in component ONOO_m (flux).
* CONSTANTS[74] is k_6NO in component model_constant (second_order_rate_constant).
* CONSTANTS[75] is k_7NO in component model_constant (second_order_rate_constant).
* CONSTANTS[76] is k_8NO in component model_constant (second_order_rate_constant).
* CONSTANTS[77] is k_9NO in component model_constant (second_order_rate_constant).
* CONSTANTS[78] is k_18NO in component model_constant (second_order_rate_constant).
* ALGEBRAIC[58] is GSSG in component GSH (micromolar).
* CONSTANTS[79] is FeLn_0 in component model_constant (micromolar).
* CONSTANTS[80] is GSH_0 in component model_constant (micromolar).
* ALGEBRAIC[59] is r_11NO in component GSH (flux).
* ALGEBRAIC[60] is r_m in component GSH (flux).
* ALGEBRAIC[61] is r_17NO in component GSH (flux).
* CONSTANTS[81] is k_11NO in component model_constant (second_order_rate_constant).
* CONSTANTS[82] is v_m in component model_constant (flux).
* CONSTANTS[83] is k_m in component model_constant (micromolar).
* CONSTANTS[84] is k_17NO in component model_constant (second_order_rate_constant).
* ALGEBRAIC[62] is r_13NO in component N2O3 (flux).
* CONSTANTS[85] is k_13NO in component model_constant (first_order_rate_constant).
* CONSTANTS[86] is k_21NO in component model_constant (second_order_rate_constant).
* CONSTANTS[87] is k_22NO in component model_constant (second_order_rate_constant).
* CONSTANTS[88] is k_19NO in component model_constant (second_order_rate_constant).
* CONSTANTS[89] is k_17bNO in component model_constant (second_order_rate_constant).
* RATES[0] is d/dt Casp8 in component Casp8 (micromolar).
* RATES[1] is d/dt Casp8Bid in component Casp8 (micromolar).
* RATES[4] is d/dt Apaf_1 in component Apaf_1 (micromolar).
* RATES[5] is d/dt CytcApaf_1 in component CytcApaf_1 (micromolar).
* RATES[6] is d/dt Cytc in component Cytc (micromolar).
* RATES[8] is d/dt Cytc_mito in component Cytc_mito (micromolar).
* RATES[10] is d/dt Bax_2 in component Bax_2 (micromolar).
* RATES[11] is d/dt tBid_mito in component tBid_mito (micromolar).
* RATES[13] is d/dt tBid in component tBid (micromolar).
* RATES[14] is d/dt tBidBax in component tBidBax (micromolar).
* RATES[12] is d/dt Bax in component Bax (micromolar).
* RATES[15] is d/dt Bcl_2 in component Bcl_2 (micromolar).
* RATES[17] is d/dt Casp3Bcl_2 in component Casp3Bcl_2 (micromolar).
* RATES[18] is d/dt Casp3Bid in component Casp3Bid (micromolar).
* RATES[3] is d/dt Bid in component Bid (micromolar).
* RATES[20] is d/dt Casp3IAP in component Casp3 (micromolar).
* RATES[16] is d/dt Casp3 in component Casp3 (micromolar).
* RATES[7] is d/dt Apop in component Apop (micromolar).
* RATES[21] is d/dt Pro9 in component Pro9 (micromolar).
* RATES[22] is d/dt ApopPro9 in component Pro9 (micromolar).
* RATES[23] is d/dt ApopPro9_2 in component ApopPro9_2 (micromolar).
* RATES[24] is d/dt ApopCasp9_2Pro3 in component ApopCasp9_2Pro3 (micromolar).
* RATES[27] is d/dt Casp9Pro3 in component Casp9Pro3 (micromolar).
* RATES[26] is d/dt Pro3 in component Pro3 (micromolar).
* RATES[29] is d/dt Casp9IAP in component IAP (micromolar).
* RATES[30] is d/dt ApopCasp9IAP in component IAP (micromolar).
* RATES[31] is d/dt ApopCasp9_2IAP in component IAP (micromolar).
* RATES[19] is d/dt IAP in component IAP (micromolar).
* RATES[32] is d/dt ApopCasp9 in component ApopCasp9 (micromolar).
* RATES[28] is d/dt Casp9 in component Casp9 (micromolar).
* RATES[25] is d/dt ApopCasp9_2 in component ApopCasp9_2 (micromolar).
* RATES[33] is d/dt NO in component NO (micromolar).
* RATES[38] is d/dt CcOX in component NO (micromolar).
* RATES[35] is d/dt NO_2 in component NO (micromolar).
* RATES[34] is d/dt O_2m in component O_2m (micromolar).
* RATES[40] is d/dt ONOO_m in component ONOO_m (micromolar).
* RATES[41] is d/dt GSH in component GSH (micromolar).
* RATES[37] is d/dt GSNO in component GSNO (micromolar).
* RATES[36] is d/dt N2O3 in component N2O3 (micromolar).
* RATES[39] is d/dt FeLn in component FeLn (micromolar).
* RATES[2] is d/dt FeLnNO in component FeLn (micromolar).
* RATES[9] is d/dt PTPC in component PTPC (micromolar).
* There are a total of 0 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 0;
STATES[1] = 0;
STATES[2] = 0;
STATES[3] = 0.004;
CONSTANTS[0] = 0.1;
CONSTANTS[1] = 10;
CONSTANTS[2] = 0.5;
CONSTANTS[3] = 0.006;
CONSTANTS[4] = 66;
STATES[4] = 0.004;
STATES[5] = 0;
STATES[6] = 0;
CONSTANTS[5] = 0.0003;
CONSTANTS[6] = 5;
CONSTANTS[7] = 0.5;
STATES[7] = 0;
CONSTANTS[8] = 50000;
CONSTANTS[9] = 0.5;
CONSTANTS[10] = 4;
STATES[8] = 0.004;
STATES[9] = 0;
CONSTANTS[11] = 0;
CONSTANTS[12] = 1;
STATES[10] = 0;
CONSTANTS[13] = 0.0003;
CONSTANTS[14] = 10;
STATES[11] = 0;
STATES[12] = 0.004;
CONSTANTS[15] = 10;
STATES[13] = 0;
CONSTANTS[16] = 10;
STATES[14] = 0;
CONSTANTS[17] = 10;
STATES[15] = 0.004;
CONSTANTS[18] = 10;
CONSTANTS[19] = 0.00003;
CONSTANTS[20] = 0.0066;
CONSTANTS[21] = 0.004;
CONSTANTS[22] = 0.006;
STATES[16] = 0;
STATES[17] = 0;
CONSTANTS[23] = 10;
CONSTANTS[24] = 0.5;
CONSTANTS[25] = 0.00008;
CONSTANTS[26] = 0.006;
CONSTANTS[27] = 0.1;
STATES[18] = 0;
CONSTANTS[28] = 10;
CONSTANTS[29] = 0.5;
CONSTANTS[30] = 0.1;
CONSTANTS[31] = 0.00003;
STATES[19] = 0.004;
STATES[20] = 0;
CONSTANTS[32] = 5;
CONSTANTS[33] = 0.0035;
STATES[21] = 0.004;
STATES[22] = 0;
STATES[23] = 0;
CONSTANTS[34] = 10;
CONSTANTS[35] = 0.5;
CONSTANTS[36] = 10;
CONSTANTS[37] = 0.5;
CONSTANTS[38] = 0.0003;
CONSTANTS[39] = 0.1;
STATES[24] = 0;
STATES[25] = 0;
STATES[26] = 0.004;
CONSTANTS[40] = 10;
CONSTANTS[41] = 0.5;
CONSTANTS[42] = 0.1;
STATES[27] = 0;
CONSTANTS[43] = 0.001;
STATES[28] = 0;
CONSTANTS[44] = 10;
CONSTANTS[45] = 0.5;
CONSTANTS[46] = 0.0003;
STATES[29] = 0;
STATES[30] = 0;
STATES[31] = 0;
STATES[32] = 0;
CONSTANTS[47] = 0.00003;
CONSTANTS[48] = 5;
CONSTANTS[49] = 0.0035;
CONSTANTS[50] = 5;
CONSTANTS[51] = 0.0035;
CONSTANTS[52] = 5;
CONSTANTS[53] = 0.0035;
CONSTANTS[54] = 5;
CONSTANTS[55] = 0.5;
CONSTANTS[56] = 5;
CONSTANTS[57] = 0.5;
STATES[33] = 0;
STATES[34] = 35;
CONSTANTS[58] = 35;
STATES[35] = 0;
STATES[36] = 0;
STATES[37] = 0;
STATES[38] = 0.1;
STATES[39] = 0.05;
CONSTANTS[59] = 1;
CONSTANTS[60] = 6700;
CONSTANTS[61] = 0.000006;
CONSTANTS[62] = 1100;
CONSTANTS[63] = 81000;
CONSTANTS[64] = 0.0002;
CONSTANTS[65] = 100;
CONSTANTS[66] = 1.21;
CONSTANTS[67] = 10;
CONSTANTS[68] = 0.1;
CONSTANTS[69] = 2400;
CONSTANTS[70] = 0.0006;
STATES[40] = 0;
STATES[41] = 10000;
CONSTANTS[71] = 5.8;
CONSTANTS[72] = 1000;
CONSTANTS[73] = 400;
CONSTANTS[74] = 0.00135;
CONSTANTS[75] = 2;
CONSTANTS[76] = 0.058;
CONSTANTS[77] = 0.025;
CONSTANTS[78] = 1;
CONSTANTS[79] = 0.05;
CONSTANTS[80] = 10000;
CONSTANTS[81] = 66;
CONSTANTS[82] = 320;
CONSTANTS[83] = 50;
CONSTANTS[84] = 66;
CONSTANTS[85] = 1600;
CONSTANTS[86] = 66;
CONSTANTS[87] = 66;
CONSTANTS[88] = 10;
CONSTANTS[89] = 0.0002;
CONSTANTS[90] = CONSTANTS[59];
CONSTANTS[91] = CONSTANTS[19]*(1.00000+pow(CONSTANTS[20], 4.00000)/(pow(CONSTANTS[20], 4.00000)+pow(CONSTANTS[21], 4.00000)));
CONSTANTS[92] = ( CONSTANTS[25]*pow(CONSTANTS[21], 4.00000))/(pow(CONSTANTS[20], 4.00000)+pow(CONSTANTS[21], 4.00000));
CONSTANTS[93] = CONSTANTS[68];
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[4] = 0.1001;
RATES[5] = 0.1001;
RATES[6] = 0.1001;
RATES[8] = 0.1001;
RATES[10] = 0.1001;
RATES[11] = 0.1001;
RATES[13] = 0.1001;
RATES[14] = 0.1001;
RATES[12] = 0.1001;
RATES[15] = 0.1001;
RATES[17] = 0.1001;
RATES[18] = 0.1001;
RATES[3] = 0.1001;
RATES[20] = 0.1001;
RATES[16] = 0.1001;
RATES[7] = 0.1001;
RATES[21] = 0.1001;
RATES[22] = 0.1001;
RATES[23] = 0.1001;
RATES[24] = 0.1001;
RATES[27] = 0.1001;
RATES[26] = 0.1001;
RATES[29] = 0.1001;
RATES[30] = 0.1001;
RATES[31] = 0.1001;
RATES[19] = 0.1001;
RATES[32] = 0.1001;
RATES[28] = 0.1001;
RATES[25] = 0.1001;
RATES[33] = 0.1001;
RATES[38] = 0.1001;
RATES[35] = 0.1001;
RATES[34] = 0.1001;
RATES[40] = 0.1001;
RATES[41] = 0.1001;
RATES[37] = 0.1001;
RATES[36] = 0.1001;
RATES[39] = 0.1001;
RATES[2] = 0.1001;
RATES[9] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - ((- ALGEBRAIC[2]+ALGEBRAIC[0]+ALGEBRAIC[1]) - ALGEBRAIC[65]) - ALGEBRAIC[3];
resid[1] = RATES[1] - ALGEBRAIC[2] - ALGEBRAIC[0];
resid[2] = RATES[4] - - ALGEBRAIC[5]+ALGEBRAIC[4];
resid[3] = RATES[5] - ALGEBRAIC[5] - 7.00000*ALGEBRAIC[6];
resid[4] = RATES[6] - (ALGEBRAIC[10] - ALGEBRAIC[5])+ALGEBRAIC[7]+ CONSTANTS[12]*ALGEBRAIC[8]*STATES[8];
resid[5] = RATES[8] - - ALGEBRAIC[10]+ALGEBRAIC[9];
resid[6] = RATES[10] - ALGEBRAIC[17]+ALGEBRAIC[11];
resid[7] = RATES[11] - (ALGEBRAIC[14] - ALGEBRAIC[13])+ALGEBRAIC[12];
resid[8] = RATES[13] - ((ALGEBRAIC[0]+ALGEBRAIC[24]) - ALGEBRAIC[14])+ALGEBRAIC[17]+ALGEBRAIC[15];
resid[9] = RATES[14] - (ALGEBRAIC[13] - ALGEBRAIC[17])+ALGEBRAIC[16];
resid[10] = RATES[12] - ((- ALGEBRAIC[13] - ALGEBRAIC[17]) - ALGEBRAIC[19])+ALGEBRAIC[18];
resid[11] = RATES[15] - (- ALGEBRAIC[20] - ALGEBRAIC[19])+ALGEBRAIC[21];
resid[12] = RATES[17] - ALGEBRAIC[20] - ALGEBRAIC[22];
resid[13] = RATES[18] - ALGEBRAIC[23] - ALGEBRAIC[24];
resid[14] = RATES[3] - (- ALGEBRAIC[2] - ALGEBRAIC[23])+ALGEBRAIC[25];
resid[15] = RATES[20] - ALGEBRAIC[27];
resid[16] = RATES[16] - ((((((ALGEBRAIC[34]+ALGEBRAIC[33]) - ALGEBRAIC[27]) - ALGEBRAIC[23])+ALGEBRAIC[24]) - ALGEBRAIC[20])+ALGEBRAIC[22]+ALGEBRAIC[26]) - ALGEBRAIC[64];
resid[17] = RATES[7] - (ALGEBRAIC[6] - ALGEBRAIC[29])+ALGEBRAIC[42];
resid[18] = RATES[21] - (- ALGEBRAIC[29] - ALGEBRAIC[30])+ALGEBRAIC[28];
resid[19] = RATES[22] - ALGEBRAIC[29] - ALGEBRAIC[30];
resid[20] = RATES[23] - ALGEBRAIC[30] - ALGEBRAIC[31];
resid[21] = RATES[24] - ALGEBRAIC[32] - ALGEBRAIC[33];
resid[22] = RATES[27] - ALGEBRAIC[35] - ALGEBRAIC[34];
resid[23] = RATES[26] - (- ALGEBRAIC[35] - ALGEBRAIC[32])+ALGEBRAIC[36];
resid[24] = RATES[29] - ALGEBRAIC[37];
resid[25] = RATES[30] - ALGEBRAIC[38];
resid[26] = RATES[31] - ALGEBRAIC[39];
resid[27] = RATES[19] - (((- ALGEBRAIC[37] - ALGEBRAIC[38]) - ALGEBRAIC[39]) - ALGEBRAIC[27])+ALGEBRAIC[40];
resid[28] = RATES[32] - (ALGEBRAIC[41] - ALGEBRAIC[42]) - ALGEBRAIC[38];
resid[29] = RATES[28] - ((((ALGEBRAIC[41]+ALGEBRAIC[42]) - ALGEBRAIC[37]) - ALGEBRAIC[35])+ALGEBRAIC[34]+ALGEBRAIC[43]) - ALGEBRAIC[63];
resid[30] = RATES[25] - (((ALGEBRAIC[31] - ALGEBRAIC[41]) - ALGEBRAIC[39]) - ALGEBRAIC[32])+ALGEBRAIC[33];
resid[31] = RATES[33] - (((((CONSTANTS[90] - ALGEBRAIC[44]) - 2.00000*ALGEBRAIC[45]) - ALGEBRAIC[46])+ALGEBRAIC[47]+ALGEBRAIC[48]) - ALGEBRAIC[49]) - ALGEBRAIC[50];
resid[32] = RATES[38] - - ALGEBRAIC[49];
resid[33] = RATES[35] - ( 2.00000*ALGEBRAIC[45] - ALGEBRAIC[46])+ALGEBRAIC[47];
resid[34] = RATES[34] - ((CONSTANTS[93] - ALGEBRAIC[44]) - ALGEBRAIC[51]) - ALGEBRAIC[52];
resid[35] = RATES[40] - ((((ALGEBRAIC[44] - ALGEBRAIC[53]) - ALGEBRAIC[54]) - ALGEBRAIC[55]) - ALGEBRAIC[56]) - ALGEBRAIC[57];
resid[36] = RATES[41] - ((- ALGEBRAIC[53] - ALGEBRAIC[59])+ 2.00000*ALGEBRAIC[60]) - ALGEBRAIC[61];
resid[37] = RATES[37] - (((ALGEBRAIC[53] - 2.00000*ALGEBRAIC[52])+ALGEBRAIC[59]) - ALGEBRAIC[48])+ALGEBRAIC[61];
resid[38] = RATES[36] - (((- ALGEBRAIC[59]+ALGEBRAIC[46]) - ALGEBRAIC[47]) - ALGEBRAIC[62]) - ALGEBRAIC[65];
resid[39] = RATES[39] - - ALGEBRAIC[50]+ALGEBRAIC[61]+ALGEBRAIC[3]+ALGEBRAIC[63]+ALGEBRAIC[64];
resid[40] = RATES[2] - (((ALGEBRAIC[50] - ALGEBRAIC[61]) - ALGEBRAIC[3]) - ALGEBRAIC[63]) - ALGEBRAIC[64];
resid[41] = RATES[9] - - ALGEBRAIC[65];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = CONSTANTS[0]*STATES[1];
ALGEBRAIC[1] = - CONSTANTS[3]*STATES[0];
ALGEBRAIC[2] = CONSTANTS[1]*STATES[0]*STATES[3] - CONSTANTS[2]*STATES[1];
ALGEBRAIC[3] = CONSTANTS[4]*STATES[2]*STATES[0];
ALGEBRAIC[4] = CONSTANTS[5] - CONSTANTS[3]*STATES[4];
ALGEBRAIC[5] = CONSTANTS[6]*STATES[6]*STATES[4] - CONSTANTS[7]*STATES[5];
ALGEBRAIC[6] = CONSTANTS[8]*pow(STATES[5], CONSTANTS[10]) - CONSTANTS[9]*STATES[7];
ALGEBRAIC[7] = - CONSTANTS[3]*STATES[6];
ALGEBRAIC[8] = CONSTANTS[11] - STATES[9];
ALGEBRAIC[9] = CONSTANTS[13] - CONSTANTS[3]*STATES[8];
ALGEBRAIC[10] = CONSTANTS[14]*STATES[10]*STATES[8];
ALGEBRAIC[11] = - CONSTANTS[3]*STATES[10];
ALGEBRAIC[12] = - CONSTANTS[3]*STATES[11];
ALGEBRAIC[13] = CONSTANTS[15]*STATES[11]*STATES[12];
ALGEBRAIC[14] = CONSTANTS[16]*STATES[13];
ALGEBRAIC[15] = - CONSTANTS[3]*STATES[13];
ALGEBRAIC[16] = - CONSTANTS[3]*STATES[14];
ALGEBRAIC[17] = CONSTANTS[17]*STATES[14]*STATES[12];
ALGEBRAIC[18] = CONSTANTS[91] - CONSTANTS[22]*STATES[12];
ALGEBRAIC[19] = CONSTANTS[18]*STATES[15]*STATES[12];
ALGEBRAIC[20] = CONSTANTS[23]*STATES[16]*STATES[15] - CONSTANTS[24]*STATES[17];
ALGEBRAIC[21] = CONSTANTS[92] - CONSTANTS[26]*STATES[15];
ALGEBRAIC[22] = CONSTANTS[27]*STATES[17];
ALGEBRAIC[23] = CONSTANTS[28]*STATES[16]*STATES[3] - CONSTANTS[29]*STATES[18];
ALGEBRAIC[24] = CONSTANTS[30]*STATES[18];
ALGEBRAIC[25] = CONSTANTS[31] - CONSTANTS[3]*STATES[3];
ALGEBRAIC[26] = - CONSTANTS[3]*STATES[16];
ALGEBRAIC[27] = CONSTANTS[32]*STATES[16]*STATES[19] - CONSTANTS[33]*STATES[20];
ALGEBRAIC[28] = CONSTANTS[38] - CONSTANTS[3]*STATES[21];
ALGEBRAIC[29] = CONSTANTS[34]*STATES[7]*STATES[21] - CONSTANTS[35]*STATES[22];
ALGEBRAIC[30] = CONSTANTS[36]*STATES[22]*STATES[21] - CONSTANTS[37]*STATES[23];
ALGEBRAIC[31] = CONSTANTS[39]*STATES[23];
ALGEBRAIC[32] = CONSTANTS[40]*STATES[25]*STATES[26] - CONSTANTS[41]*STATES[24];
ALGEBRAIC[33] = CONSTANTS[42]*STATES[24];
ALGEBRAIC[34] = CONSTANTS[43]*STATES[27];
ALGEBRAIC[35] = CONSTANTS[44]*STATES[28]*STATES[26] - CONSTANTS[45]*STATES[27];
ALGEBRAIC[36] = CONSTANTS[46] - CONSTANTS[3]*STATES[26];
ALGEBRAIC[37] = CONSTANTS[48]*STATES[28]*STATES[19] - CONSTANTS[49]*STATES[29];
ALGEBRAIC[38] = CONSTANTS[50]*STATES[32]*STATES[19] - CONSTANTS[51]*STATES[30];
ALGEBRAIC[39] = CONSTANTS[52]*STATES[25]*STATES[19] - CONSTANTS[53]*STATES[31];
ALGEBRAIC[40] = CONSTANTS[47] - CONSTANTS[3]*STATES[19];
ALGEBRAIC[41] = CONSTANTS[54]*STATES[25] - CONSTANTS[55]*STATES[32]*STATES[28];
ALGEBRAIC[42] = CONSTANTS[56]*STATES[32] - CONSTANTS[57]*STATES[7]*STATES[28];
ALGEBRAIC[43] = - CONSTANTS[3]*STATES[28];
ALGEBRAIC[44] = CONSTANTS[60]*STATES[33]*STATES[34];
ALGEBRAIC[45] = CONSTANTS[61]*pow(STATES[33], 2.00000)*CONSTANTS[58];
ALGEBRAIC[46] = CONSTANTS[62]*STATES[35]*STATES[33];
ALGEBRAIC[47] = CONSTANTS[63]*STATES[36];
ALGEBRAIC[48] = CONSTANTS[64]*STATES[37];
ALGEBRAIC[49] = CONSTANTS[65]*STATES[38]*STATES[33];
ALGEBRAIC[50] = CONSTANTS[66]*STATES[39]*STATES[33];
ALGEBRAIC[51] = CONSTANTS[69]*CONSTANTS[67]*STATES[34];
ALGEBRAIC[52] = CONSTANTS[70]*pow(STATES[37], 2.00000)*STATES[34];
ALGEBRAIC[53] = CONSTANTS[74]*STATES[40]*STATES[41];
ALGEBRAIC[54] = CONSTANTS[75]*STATES[40]*CONSTANTS[71];
ALGEBRAIC[55] = CONSTANTS[76]*STATES[40]*CONSTANTS[72];
ALGEBRAIC[56] = CONSTANTS[77]*STATES[40]*CONSTANTS[73];
ALGEBRAIC[57] = CONSTANTS[78]*STATES[40]*STATES[9];
ALGEBRAIC[59] = CONSTANTS[81]*STATES[36]*STATES[41];
ALGEBRAIC[58] = ((CONSTANTS[80] - STATES[41]) - STATES[37])/2.00000;
ALGEBRAIC[60] = ( CONSTANTS[82]*ALGEBRAIC[58])/(CONSTANTS[83]+ALGEBRAIC[58]);
ALGEBRAIC[61] = CONSTANTS[84]*STATES[2]*STATES[41];
ALGEBRAIC[62] = CONSTANTS[85]*STATES[36];
ALGEBRAIC[63] = CONSTANTS[86]*STATES[2]*STATES[28];
ALGEBRAIC[64] = CONSTANTS[87]*STATES[2]*STATES[16];
ALGEBRAIC[65] = CONSTANTS[88]*STATES[36]*STATES[0];
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
SI[6] = 1.0;
SI[7] = 1.0;
SI[8] = 1.0;
SI[9] = 1.0;
SI[10] = 1.0;
SI[11] = 1.0;
SI[12] = 1.0;
SI[13] = 1.0;
SI[14] = 1.0;
SI[15] = 1.0;
SI[16] = 1.0;
SI[17] = 1.0;
SI[18] = 1.0;
SI[19] = 1.0;
SI[20] = 1.0;
SI[21] = 1.0;
SI[22] = 1.0;
SI[23] = 1.0;
SI[24] = 1.0;
SI[25] = 1.0;
SI[26] = 1.0;
SI[27] = 1.0;
SI[28] = 1.0;
SI[29] = 1.0;
SI[30] = 1.0;
SI[31] = 1.0;
SI[32] = 1.0;
SI[33] = 1.0;
SI[34] = 1.0;
SI[35] = 1.0;
SI[36] = 1.0;
SI[37] = 1.0;
SI[38] = 1.0;
SI[39] = 1.0;
SI[40] = 1.0;
SI[41] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}