Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 31 entries in the algebraic variable array.
There are a total of 8 entries in each of the rate and state variable arrays.
There are a total of 22 entries in the constant variable array.
*/
/*
* VOI is t in component environment (second).
* CONSTANTS[0] is C_m in component environment (fF).
* STATES[0] is q_K_o in component environment (fmol).
* STATES[1] is q_K_i in component environment (fmol).
* STATES[2] is q_Sa in component environment (fmol).
* STATES[3] is q_Sb in component environment (fmol).
* STATES[4] is q_Sc in component environment (fmol).
* STATES[5] is q_Sd in component environment (fmol).
* STATES[6] is q_mem in component environment (fC).
* STATES[7] is Vmem in component environment (volt).
* CONSTANTS[1] is R in component environment (J_per_K_per_mol).
* CONSTANTS[2] is T in component environment (kelvin).
* CONSTANTS[3] is F in component environment (C_per_mol).
* ALGEBRAIC[12] is v_Kr in component Kr (fmol_per_sec).
* ALGEBRAIC[30] is I_mem_Kr in component Kr (fA).
* ALGEBRAIC[1] is I_stim in component environment (fA).
* CONSTANTS[4] is stimPeriod in component environment (second).
* CONSTANTS[5] is stimDuration in component environment (second).
* ALGEBRAIC[0] is tPeriod in component environment (second).
* ALGEBRAIC[29] is i_Kr in component environment (uA_per_uF).
* CONSTANTS[6] is kappa_Kr in component Kr_parameters (fmol_per_sec).
* CONSTANTS[7] is kappa_xr10 in component Kr_parameters (fmol_per_sec).
* CONSTANTS[8] is kappa_xr11 in component Kr_parameters (fmol_per_sec).
* CONSTANTS[9] is kappa_xr20 in component Kr_parameters (fmol_per_sec).
* CONSTANTS[10] is kappa_xr21 in component Kr_parameters (fmol_per_sec).
* CONSTANTS[11] is K_K_i in component Kr_parameters (per_fmol).
* CONSTANTS[12] is K_K_o in component Kr_parameters (per_fmol).
* CONSTANTS[13] is K_Sa_Kr in component Kr_parameters (per_fmol).
* CONSTANTS[14] is K_Sb_Kr in component Kr_parameters (per_fmol).
* CONSTANTS[15] is K_Sc_Kr in component Kr_parameters (per_fmol).
* CONSTANTS[16] is K_Sd_Kr in component Kr_parameters (per_fmol).
* CONSTANTS[17] is zK in component Kr_parameters (dimensionless).
* CONSTANTS[18] is z_xr1_f in component Kr_parameters (dimensionless).
* CONSTANTS[19] is z_xr1_r in component Kr_parameters (dimensionless).
* CONSTANTS[20] is z_xr2_f in component Kr_parameters (dimensionless).
* CONSTANTS[21] is z_xr2_r in component Kr_parameters (dimensionless).
* ALGEBRAIC[2] is u_K_i in component Kr (J_per_mol).
* ALGEBRAIC[3] is u_K_o in component Kr (J_per_mol).
* ALGEBRAIC[4] is V_mem in component Kr (J_per_C).
* ALGEBRAIC[9] is Am_Kr in component Kr (J_per_mol).
* ALGEBRAIC[10] is Af_Kr in component Kr (J_per_mol).
* ALGEBRAIC[11] is Ar_Kr in component Kr (J_per_mol).
* ALGEBRAIC[25] is v_Sa in component Kr (fmol_per_sec).
* ALGEBRAIC[26] is v_Sb in component Kr (fmol_per_sec).
* ALGEBRAIC[27] is v_Sc in component Kr (fmol_per_sec).
* ALGEBRAIC[28] is v_Sd in component Kr (fmol_per_sec).
* ALGEBRAIC[21] is v_x10 in component Kr (fmol_per_sec).
* ALGEBRAIC[22] is v_x11 in component Kr (fmol_per_sec).
* ALGEBRAIC[23] is v_x20 in component Kr (fmol_per_sec).
* ALGEBRAIC[24] is v_x21 in component Kr (fmol_per_sec).
* ALGEBRAIC[5] is mu_Sa in component Kr (J_per_mol).
* ALGEBRAIC[6] is mu_Sb in component Kr (J_per_mol).
* ALGEBRAIC[7] is mu_Sc in component Kr (J_per_mol).
* ALGEBRAIC[8] is mu_Sd in component Kr (J_per_mol).
* ALGEBRAIC[13] is Af_x10 in component Kr (J_per_mol).
* ALGEBRAIC[14] is Ar_x10 in component Kr (J_per_mol).
* ALGEBRAIC[15] is Af_x11 in component Kr (J_per_mol).
* ALGEBRAIC[16] is Ar_x11 in component Kr (J_per_mol).
* ALGEBRAIC[17] is Af_x20 in component Kr (J_per_mol).
* ALGEBRAIC[18] is Ar_x20 in component Kr (J_per_mol).
* ALGEBRAIC[19] is Af_x21 in component Kr (J_per_mol).
* ALGEBRAIC[20] is Ar_x21 in component Kr (J_per_mol).
* RATES[1] is d/dt q_K_i in component environment (fmol).
* RATES[0] is d/dt q_K_o in component environment (fmol).
* RATES[6] is d/dt q_mem in component environment (fC).
* RATES[2] is d/dt q_Sa in component environment (fmol).
* RATES[3] is d/dt q_Sb in component environment (fmol).
* RATES[4] is d/dt q_Sc in component environment (fmol).
* RATES[5] is d/dt q_Sd in component environment (fmol).
* There are a total of 2 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 153400;
STATES[0] = 27.9828;
STATES[1] = 5510;
STATES[2] = 1.598306E-07;
STATES[3] = 1.598306E-07;
STATES[4] = 1.598306E-07;
STATES[5] = 1.598306E-07;
STATES[6] = -13039;
CONSTANTS[1] = 8.31;
CONSTANTS[2] = 310;
CONSTANTS[3] = 96500;
CONSTANTS[4] = 1;
CONSTANTS[5] = 0.0001;
CONSTANTS[6] = 271.854;
CONSTANTS[7] = 2.51352;
CONSTANTS[8] = 0.0672974;
CONSTANTS[9] = 8.45146;
CONSTANTS[10] = 68.9799;
CONSTANTS[11] = 1.94622;
CONSTANTS[12] = 12.9197;
CONSTANTS[13] = 1.47312;
CONSTANTS[14] = 0.180487;
CONSTANTS[15] = 55.02;
CONSTANTS[16] = 6.74109;
CONSTANTS[17] = 1;
CONSTANTS[18] = 1.6149028778859738;
CONSTANTS[19] = -1.3218634652232777;
CONSTANTS[20] = -1.0273976425216251;
CONSTANTS[21] = -0.18153135376657775;
STATES[7] = 0.1001;
RATES[1] = 0.1001;
RATES[0] = 0.1001;
RATES[6] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
RATES[4] = 0.1001;
RATES[5] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[1] - - ALGEBRAIC[12];
resid[1] = RATES[0] - ALGEBRAIC[12];
resid[2] = RATES[6] - ALGEBRAIC[30]+ALGEBRAIC[1];
resid[3] = STATES[6] - STATES[7]*CONSTANTS[0];
resid[4] = RATES[2] - ALGEBRAIC[25];
resid[5] = RATES[3] - ALGEBRAIC[26];
resid[6] = RATES[4] - ALGEBRAIC[27];
resid[7] = RATES[5] - ALGEBRAIC[28];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[29] = (( 1.00000e-09*CONSTANTS[3])/CONSTANTS[0])*ALGEBRAIC[12];
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = VOI - floor(VOI/CONSTANTS[4])*CONSTANTS[4];
ALGEBRAIC[1] = (CONDVAR[0]>=0.00000&&CONDVAR[1]<=0.00000 ? ( 0.00000*0.0750000*CONSTANTS[0])/CONSTANTS[5] : 0.00000);
ALGEBRAIC[4] = STATES[6]/CONSTANTS[0];
ALGEBRAIC[9] = CONSTANTS[17]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[2] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[11]*STATES[1]);
ALGEBRAIC[8] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[16]*STATES[5]);
ALGEBRAIC[10] = ALGEBRAIC[8]+ALGEBRAIC[2]+ALGEBRAIC[9];
ALGEBRAIC[3] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[12]*STATES[0]);
ALGEBRAIC[11] = ALGEBRAIC[8]+ALGEBRAIC[3];
ALGEBRAIC[12] = (ALGEBRAIC[9]==0.00000 ? 1.00000*CONSTANTS[6]*(exp(ALGEBRAIC[10]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[11]/( CONSTANTS[1]*CONSTANTS[2]))) : ((( 1.00000*CONSTANTS[6]*ALGEBRAIC[9])/( CONSTANTS[1]*CONSTANTS[2]))/(exp(ALGEBRAIC[9]/( CONSTANTS[1]*CONSTANTS[2])) - 1.00000))*(exp(ALGEBRAIC[10]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[11]/( CONSTANTS[1]*CONSTANTS[2]))));
ALGEBRAIC[5] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[13]*STATES[2]);
ALGEBRAIC[13] = ALGEBRAIC[5]+ CONSTANTS[18]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[6] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[14]*STATES[3]);
ALGEBRAIC[14] = ALGEBRAIC[6]+ CONSTANTS[19]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[21] = CONSTANTS[7]*(exp(ALGEBRAIC[13]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[14]/( CONSTANTS[1]*CONSTANTS[2])));
ALGEBRAIC[17] = ALGEBRAIC[5]+ CONSTANTS[20]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[7] = CONSTANTS[1]*CONSTANTS[2]*log( CONSTANTS[15]*STATES[4]);
ALGEBRAIC[18] = ALGEBRAIC[7]+ CONSTANTS[21]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[23] = CONSTANTS[9]*(exp(ALGEBRAIC[17]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[18]/( CONSTANTS[1]*CONSTANTS[2])));
ALGEBRAIC[25] = - ALGEBRAIC[21] - ALGEBRAIC[23];
ALGEBRAIC[19] = ALGEBRAIC[6]+ CONSTANTS[20]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[20] = ALGEBRAIC[8]+ CONSTANTS[21]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[24] = CONSTANTS[10]*(exp(ALGEBRAIC[19]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[20]/( CONSTANTS[1]*CONSTANTS[2])));
ALGEBRAIC[26] = ALGEBRAIC[21] - ALGEBRAIC[24];
ALGEBRAIC[15] = ALGEBRAIC[7]+ CONSTANTS[18]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[16] = ALGEBRAIC[8]+ CONSTANTS[19]*CONSTANTS[3]*ALGEBRAIC[4];
ALGEBRAIC[22] = CONSTANTS[8]*(exp(ALGEBRAIC[15]/( CONSTANTS[1]*CONSTANTS[2])) - exp(ALGEBRAIC[16]/( CONSTANTS[1]*CONSTANTS[2])));
ALGEBRAIC[27] = ALGEBRAIC[23] - ALGEBRAIC[22];
ALGEBRAIC[28] = ALGEBRAIC[22]+ALGEBRAIC[24];
ALGEBRAIC[30] = CONSTANTS[3]*( - CONSTANTS[17]*ALGEBRAIC[12]+ ALGEBRAIC[21]*(CONSTANTS[19] - CONSTANTS[18])+ ALGEBRAIC[22]*(CONSTANTS[19] - CONSTANTS[19])+ ALGEBRAIC[23]*(CONSTANTS[21] - CONSTANTS[20])+ ALGEBRAIC[24]*(CONSTANTS[21] - CONSTANTS[20]));
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
SI[6] = 1.0;
SI[7] = 0.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
CONDVAR[0] = ALGEBRAIC[0] - 0.300000;
CONDVAR[1] = ALGEBRAIC[0] - (0.300000+CONSTANTS[5]);
}
