/* There are a total of 53 entries in the algebraic variable array. There are a total of 7 entries in each of the rate and state variable arrays. There are a total of 63 entries in the constant variable array. */ /* * VOI is t in component params_BG (second). * CONSTANTS[0] is R in component params_BG (J_per_K_mol). * CONSTANTS[1] is T in component params_BG (kelvin). * CONSTANTS[2] is F in component params_BG (C_per_mol). * CONSTANTS[3] is K_Glui in component params_BG (per_fmol). * CONSTANTS[50] is q_Glui in component params_BG (fmol). * CONSTANTS[4] is K_Gluo in component params_BG (per_fmol). * CONSTANTS[52] is q_Gluo in component params_BG (fmol). * CONSTANTS[5] is K_Hi in component params_BG (per_fmol). * CONSTANTS[58] is q_Hi in component params_BG (fmol). * CONSTANTS[6] is K_Ho in component params_BG (per_fmol). * CONSTANTS[60] is q_Ho in component params_BG (fmol). * CONSTANTS[7] is K_Ki in component params_BG (per_fmol). * CONSTANTS[54] is q_Ki in component params_BG (fmol). * CONSTANTS[8] is K_Ko in component params_BG (per_fmol). * CONSTANTS[56] is q_Ko in component params_BG (fmol). * CONSTANTS[9] is K_Nai in component params_BG (per_fmol). * CONSTANTS[46] is q_Nai in component params_BG (fmol). * CONSTANTS[10] is K_Nao in component params_BG (per_fmol). * CONSTANTS[48] is q_Nao in component params_BG (fmol). * CONSTANTS[11] is K_1 in component params_BG (per_fmol). * CONSTANTS[12] is q_init_1 in component params_BG (fmol). * CONSTANTS[13] is K_2 in component params_BG (per_fmol). * CONSTANTS[14] is q_init_2 in component params_BG (fmol). * CONSTANTS[15] is K_3 in component params_BG (per_fmol). * CONSTANTS[16] is q_init_3 in component params_BG (fmol). * CONSTANTS[17] is K_4 in component params_BG (per_fmol). * CONSTANTS[18] is q_init_4 in component params_BG (fmol). * CONSTANTS[19] is K_5 in component params_BG (per_fmol). * CONSTANTS[20] is q_init_5 in component params_BG (fmol). * CONSTANTS[21] is K_6 in component params_BG (per_fmol). * CONSTANTS[22] is q_init_6 in component params_BG (fmol). * CONSTANTS[23] is kappa_r1 in component params_BG (fmol_per_s). * CONSTANTS[24] is kappa_r2 in component params_BG (fmol_per_s). * CONSTANTS[25] is kappa_r3 in component params_BG (fmol_per_s). * CONSTANTS[26] is kappa_r4 in component params_BG (fmol_per_s). * CONSTANTS[27] is kappa_r5 in component params_BG (fmol_per_s). * CONSTANTS[28] is kappa_r6 in component params_BG (fmol_per_s). * CONSTANTS[29] is kappa_r7 in component params_BG (fmol_per_s). * CONSTANTS[59] is mu_Hi in component BG_EAAT2 (J_per_mol). * CONSTANTS[61] is mu_Ho in component BG_EAAT2 (J_per_mol). * CONSTANTS[51] is mu_Glui in component BG_EAAT2 (J_per_mol). * CONSTANTS[53] is mu_Gluo in component BG_EAAT2 (J_per_mol). * CONSTANTS[47] is mu_Nai in component BG_EAAT2 (J_per_mol). * CONSTANTS[49] is mu_Nao in component BG_EAAT2 (J_per_mol). * CONSTANTS[55] is mu_Ki in component BG_EAAT2 (J_per_mol). * CONSTANTS[57] is mu_Ko in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[0] is mu_1 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[40] is v_1 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[1] is mu_2 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[41] is v_2 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[2] is mu_3 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[42] is v_3 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[3] is mu_4 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[43] is v_4 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[4] is mu_5 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[23] is v_5 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[5] is mu_6 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[24] is v_6 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[27] is V_Vm in component BG_EAAT2 (volt). * ALGEBRAIC[25] is V0_Vm in component params_BG (volt). * CONSTANTS[30] is z_zf1 in component params_BG (dimensionless). * CONSTANTS[31] is z_zr1 in component params_BG (dimensionless). * CONSTANTS[32] is z_zf2 in component params_BG (dimensionless). * CONSTANTS[33] is z_zr2 in component params_BG (dimensionless). * ALGEBRAIC[28] is Vm_zf1 in component BG_EAAT2 (volt). * ALGEBRAIC[48] is I_zf1 in component BG_EAAT2 (fA). * ALGEBRAIC[32] is mu_zf1 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[44] is v_zf1 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[29] is Vm_zr1 in component BG_EAAT2 (volt). * ALGEBRAIC[49] is I_zr1 in component BG_EAAT2 (fA). * ALGEBRAIC[33] is mu_zr1 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[45] is v_zr1 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[30] is Vm_zf2 in component BG_EAAT2 (volt). * ALGEBRAIC[50] is I_zf2 in component BG_EAAT2 (fA). * ALGEBRAIC[34] is mu_zf2 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[46] is v_zf2 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[31] is Vm_zr2 in component BG_EAAT2 (volt). * ALGEBRAIC[51] is I_zr2 in component BG_EAAT2 (fA). * ALGEBRAIC[35] is mu_zr2 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[47] is v_zr2 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[6] is A_f_r1 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[18] is v_r1 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[7] is A_r_r1 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[8] is A_f_r2 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[38] is v_r2 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[36] is A_r_r2 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[9] is A_f_r3 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[19] is v_r3 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[10] is A_r_r3 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[11] is A_f_r4 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[39] is v_r4 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[37] is A_r_r4 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[12] is A_f_r5 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[20] is v_r5 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[13] is A_r_r5 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[14] is A_f_r6 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[21] is v_r6 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[15] is A_r_r6 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[16] is A_f_r7 in component BG_EAAT2 (J_per_mol). * ALGEBRAIC[22] is v_r7 in component BG_EAAT2 (fmol_per_s). * ALGEBRAIC[17] is A_r_r7 in component BG_EAAT2 (J_per_mol). * STATES[0] is q_1 in component BG_EAAT2 (fmol). * STATES[1] is q_2 in component BG_EAAT2 (fmol). * STATES[2] is q_3 in component BG_EAAT2 (fmol). * STATES[3] is q_4 in component BG_EAAT2 (fmol). * STATES[4] is q_5 in component BG_EAAT2 (fmol). * STATES[5] is q_6 in component BG_EAAT2 (fmol). * ALGEBRAIC[52] is Ii in component BG_EAAT2 (fA). * ALGEBRAIC[26] is I_ss in component BG_EAAT2 (fA). * CONSTANTS[34] is nNa in component BG_EAAT2 (dimensionless). * CONSTANTS[35] is Nai in component params_BG (mM). * CONSTANTS[36] is Nao in component params_BG (mM). * CONSTANTS[37] is Glui in component params_BG (mM). * CONSTANTS[38] is Gluo in component params_BG (mM). * CONSTANTS[39] is Hi in component params_BG (mM). * CONSTANTS[40] is Ho in component params_BG (mM). * CONSTANTS[41] is Ki in component params_BG (mM). * CONSTANTS[42] is Ko in component params_BG (mM). * CONSTANTS[43] is V_i in component params_BG (pL). * CONSTANTS[44] is V_o in component params_BG (pL). * STATES[6] is V_E in component params_BG (volt). * CONSTANTS[45] is dt in component params_BG (second). * RATES[0] is d/dt q_1 in component BG_EAAT2 (fmol). * RATES[1] is d/dt q_2 in component BG_EAAT2 (fmol). * RATES[2] is d/dt q_3 in component BG_EAAT2 (fmol). * RATES[3] is d/dt q_4 in component BG_EAAT2 (fmol). * RATES[4] is d/dt q_5 in component BG_EAAT2 (fmol). * RATES[5] is d/dt q_6 in component BG_EAAT2 (fmol). * RATES[6] is d/dt V_E in component params_BG (volt). * There are a total of 0 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { CONSTANTS[0] = 8.31; CONSTANTS[1] = 293; CONSTANTS[2] = 96485; CONSTANTS[3] = 1e-06; CONSTANTS[4] = 1e-06; CONSTANTS[5] = 1e-06; CONSTANTS[6] = 1e-06; CONSTANTS[7] = 1e-06; CONSTANTS[8] = 1e-06; CONSTANTS[9] = 1e-08; CONSTANTS[10] = 1e-08; CONSTANTS[11] = 1; CONSTANTS[12] = 1; CONSTANTS[13] = 1; CONSTANTS[14] = 1; CONSTANTS[15] = 1; CONSTANTS[16] = 1; CONSTANTS[17] = 1; CONSTANTS[18] = 1; CONSTANTS[19] = 1; CONSTANTS[20] = 1; CONSTANTS[21] = 1; CONSTANTS[22] = 1; CONSTANTS[23] = 1; CONSTANTS[24] = 1; CONSTANTS[25] = 1; CONSTANTS[26] = 1; CONSTANTS[27] = 1; CONSTANTS[28] = 1; CONSTANTS[29] = 1; CONSTANTS[30] = 1; CONSTANTS[31] = 1; CONSTANTS[32] = 1; CONSTANTS[33] = 1; CONSTANTS[34] = 3; CONSTANTS[35] = 20; CONSTANTS[36] = 100; CONSTANTS[37] = 10e-3; CONSTANTS[38] = 1e-12; CONSTANTS[39] = 10e-3; CONSTANTS[40] = 1e-12; CONSTANTS[41] = 10e-3; CONSTANTS[42] = 1e-12; CONSTANTS[43] = 8.5e5; CONSTANTS[44] = 8.5e5; STATES[6] = -0.05; CONSTANTS[45] = 1e-3; CONSTANTS[46] = CONSTANTS[35]*CONSTANTS[43]; CONSTANTS[62] = 0.00000; CONSTANTS[47] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[9]*CONSTANTS[46]); CONSTANTS[48] = CONSTANTS[36]*CONSTANTS[44]; CONSTANTS[49] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[10]*CONSTANTS[48]); CONSTANTS[50] = CONSTANTS[37]*CONSTANTS[43]; CONSTANTS[51] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[3]*CONSTANTS[50]); CONSTANTS[52] = CONSTANTS[38]*CONSTANTS[44]; CONSTANTS[53] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[4]*CONSTANTS[52]); CONSTANTS[54] = CONSTANTS[41]*CONSTANTS[43]; CONSTANTS[55] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[7]*CONSTANTS[54]); CONSTANTS[56] = CONSTANTS[42]*CONSTANTS[44]; CONSTANTS[57] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[8]*CONSTANTS[56]); CONSTANTS[58] = CONSTANTS[39]*CONSTANTS[43]; CONSTANTS[59] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[5]*CONSTANTS[58]); CONSTANTS[60] = CONSTANTS[40]*CONSTANTS[44]; CONSTANTS[61] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[6]*CONSTANTS[60]); STATES[0] = CONSTANTS[12]; STATES[1] = CONSTANTS[14]; STATES[2] = CONSTANTS[16]; STATES[3] = CONSTANTS[18]; STATES[4] = CONSTANTS[20]; STATES[5] = CONSTANTS[22]; RATES[0] = 0.1001; RATES[1] = 0.1001; RATES[2] = 0.1001; RATES[3] = 0.1001; RATES[4] = 0.1001; RATES[5] = 0.1001; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - ALGEBRAIC[40]; resid[1] = RATES[1] - ALGEBRAIC[41]; resid[2] = RATES[2] - ALGEBRAIC[42]; resid[3] = RATES[3] - ALGEBRAIC[43]; resid[4] = RATES[4] - ALGEBRAIC[23]; resid[5] = RATES[5] - ALGEBRAIC[24]; resid[6] = RATES[6] - CONSTANTS[62]; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[26] = 2.00000*CONSTANTS[2]*- ALGEBRAIC[21]; ALGEBRAIC[28] = ALGEBRAIC[27]; ALGEBRAIC[30] = ALGEBRAIC[27]; ALGEBRAIC[32] = CONSTANTS[30]*CONSTANTS[2]*ALGEBRAIC[28]; ALGEBRAIC[34] = CONSTANTS[32]*CONSTANTS[2]*ALGEBRAIC[30]; ALGEBRAIC[44] = ALGEBRAIC[38]; ALGEBRAIC[45] = ALGEBRAIC[38]; ALGEBRAIC[46] = ALGEBRAIC[39]; ALGEBRAIC[47] = ALGEBRAIC[39]; ALGEBRAIC[48] = CONSTANTS[30]*CONSTANTS[2]*ALGEBRAIC[44]; ALGEBRAIC[49] = CONSTANTS[31]*CONSTANTS[2]*ALGEBRAIC[45]; ALGEBRAIC[50] = CONSTANTS[32]*CONSTANTS[2]*ALGEBRAIC[46]; ALGEBRAIC[51] = CONSTANTS[33]*CONSTANTS[2]*ALGEBRAIC[47]; ALGEBRAIC[52] = ALGEBRAIC[48]+ALGEBRAIC[49]+ALGEBRAIC[50]+ALGEBRAIC[51]; } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[3] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[17]*STATES[3]); ALGEBRAIC[12] = ALGEBRAIC[3]+CONSTANTS[55]; ALGEBRAIC[4] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[19]*STATES[4]); ALGEBRAIC[13] = ALGEBRAIC[4]+ CONSTANTS[34]*CONSTANTS[47]; ALGEBRAIC[20] = CONSTANTS[27]*(exp(ALGEBRAIC[12]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[13]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[14] = ALGEBRAIC[4]; ALGEBRAIC[5] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[21]*STATES[5]); ALGEBRAIC[15] = ALGEBRAIC[5]+CONSTANTS[57]; ALGEBRAIC[21] = CONSTANTS[28]*(exp(ALGEBRAIC[14]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[15]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[23] = ALGEBRAIC[20] - ALGEBRAIC[21]; ALGEBRAIC[6] = CONSTANTS[34]*CONSTANTS[49]+ALGEBRAIC[5]; ALGEBRAIC[0] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[11]*STATES[0]); ALGEBRAIC[7] = ALGEBRAIC[0]; ALGEBRAIC[18] = CONSTANTS[23]*(exp(ALGEBRAIC[6]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[7]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[24] = ALGEBRAIC[21] - ALGEBRAIC[18]; ALGEBRAIC[8] = ALGEBRAIC[0]+CONSTANTS[61]+CONSTANTS[53]; ALGEBRAIC[1] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[13]*STATES[1]); ALGEBRAIC[25] = STATES[6]; ALGEBRAIC[27] = ALGEBRAIC[25]; ALGEBRAIC[29] = ALGEBRAIC[27]; ALGEBRAIC[33] = CONSTANTS[31]*CONSTANTS[2]*ALGEBRAIC[29]; ALGEBRAIC[36] = ALGEBRAIC[1]+ALGEBRAIC[33]; ALGEBRAIC[38] = CONSTANTS[24]*(exp(ALGEBRAIC[8]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[36]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[16] = ALGEBRAIC[0]; ALGEBRAIC[17] = ALGEBRAIC[3]; ALGEBRAIC[22] = CONSTANTS[29]*(exp(ALGEBRAIC[16]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[17]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[40] = (ALGEBRAIC[18] - ALGEBRAIC[38]) - ALGEBRAIC[22]; ALGEBRAIC[9] = ALGEBRAIC[1]; ALGEBRAIC[2] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[15]*STATES[2]); ALGEBRAIC[10] = ALGEBRAIC[2]; ALGEBRAIC[19] = CONSTANTS[25]*(exp(ALGEBRAIC[9]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[10]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[41] = ALGEBRAIC[38] - ALGEBRAIC[19]; ALGEBRAIC[11] = ALGEBRAIC[2]; ALGEBRAIC[31] = ALGEBRAIC[27]; ALGEBRAIC[35] = CONSTANTS[33]*CONSTANTS[2]*ALGEBRAIC[31]; ALGEBRAIC[37] = ALGEBRAIC[3]+CONSTANTS[59]+CONSTANTS[51]+ALGEBRAIC[35]; ALGEBRAIC[39] = CONSTANTS[26]*(exp(ALGEBRAIC[11]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[37]/( CONSTANTS[0]*CONSTANTS[1]))); ALGEBRAIC[42] = ALGEBRAIC[19] - ALGEBRAIC[39]; ALGEBRAIC[43] = (ALGEBRAIC[39] - ALGEBRAIC[20])+ALGEBRAIC[22]; } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; SI[3] = 1.0; SI[4] = 1.0; SI[5] = 1.0; SI[6] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { }