Generated Code

The following is f77 code generated by the CellML API from this CellML file. (Back to language selection)

The raw code is available. 

C
C There are a total of 53 entries in the algebraic variable array.
C There are a total of 7 entries in each of the rate and state variable arrays.
C There are a total of 63 entries in the constant variable array.
C
C
C VOI is t in component params_BG (second).
C CONSTS(1) is R in component params_BG (J_per_K_mol).
C CONSTS(2) is T in component params_BG (kelvin).
C CONSTS(3) is F in component params_BG (C_per_mol).
C CONSTS(4) is K_Glui in component params_BG (per_fmol).
C CONSTS(51) is q_Glui in component params_BG (fmol).
C CONSTS(5) is K_Gluo in component params_BG (per_fmol).
C CONSTS(53) is q_Gluo in component params_BG (fmol).
C CONSTS(6) is K_Hi in component params_BG (per_fmol).
C CONSTS(59) is q_Hi in component params_BG (fmol).
C CONSTS(7) is K_Ho in component params_BG (per_fmol).
C CONSTS(61) is q_Ho in component params_BG (fmol).
C CONSTS(8) is K_Ki in component params_BG (per_fmol).
C CONSTS(55) is q_Ki in component params_BG (fmol).
C CONSTS(9) is K_Ko in component params_BG (per_fmol).
C CONSTS(57) is q_Ko in component params_BG (fmol).
C CONSTS(10) is K_Nai in component params_BG (per_fmol).
C CONSTS(47) is q_Nai in component params_BG (fmol).
C CONSTS(11) is K_Nao in component params_BG (per_fmol).
C CONSTS(49) is q_Nao in component params_BG (fmol).
C CONSTS(12) is K_1 in component params_BG (per_fmol).
C CONSTS(13) is q_init_1 in component params_BG (fmol).
C CONSTS(14) is K_2 in component params_BG (per_fmol).
C CONSTS(15) is q_init_2 in component params_BG (fmol).
C CONSTS(16) is K_3 in component params_BG (per_fmol).
C CONSTS(17) is q_init_3 in component params_BG (fmol).
C CONSTS(18) is K_4 in component params_BG (per_fmol).
C CONSTS(19) is q_init_4 in component params_BG (fmol).
C CONSTS(20) is K_5 in component params_BG (per_fmol).
C CONSTS(21) is q_init_5 in component params_BG (fmol).
C CONSTS(22) is K_6 in component params_BG (per_fmol).
C CONSTS(23) is q_init_6 in component params_BG (fmol).
C CONSTS(24) is kappa_r1 in component params_BG (fmol_per_s).
C CONSTS(25) is kappa_r2 in component params_BG (fmol_per_s).
C CONSTS(26) is kappa_r3 in component params_BG (fmol_per_s).
C CONSTS(27) is kappa_r4 in component params_BG (fmol_per_s).
C CONSTS(28) is kappa_r5 in component params_BG (fmol_per_s).
C CONSTS(29) is kappa_r6 in component params_BG (fmol_per_s).
C CONSTS(30) is kappa_r7 in component params_BG (fmol_per_s).
C CONSTS(60) is mu_Hi in component BG_EAAT2 (J_per_mol).
C CONSTS(62) is mu_Ho in component BG_EAAT2 (J_per_mol).
C CONSTS(52) is mu_Glui in component BG_EAAT2 (J_per_mol).
C CONSTS(54) is mu_Gluo in component BG_EAAT2 (J_per_mol).
C CONSTS(48) is mu_Nai in component BG_EAAT2 (J_per_mol).
C CONSTS(50) is mu_Nao in component BG_EAAT2 (J_per_mol).
C CONSTS(56) is mu_Ki in component BG_EAAT2 (J_per_mol).
C CONSTS(58) is mu_Ko in component BG_EAAT2 (J_per_mol).
C ALGBRC(1) is mu_1 in component BG_EAAT2 (J_per_mol).
C ALGBRC(37) is v_1 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(2) is mu_2 in component BG_EAAT2 (J_per_mol).
C ALGBRC(38) is v_2 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(3) is mu_3 in component BG_EAAT2 (J_per_mol).
C ALGBRC(47) is v_3 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(4) is mu_4 in component BG_EAAT2 (J_per_mol).
C ALGBRC(48) is v_4 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(5) is mu_5 in component BG_EAAT2 (J_per_mol).
C ALGBRC(24) is v_5 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(6) is mu_6 in component BG_EAAT2 (J_per_mol).
C ALGBRC(25) is v_6 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(28) is V_Vm in component BG_EAAT2 (volt).
C ALGBRC(26) is V0_Vm in component params_BG (volt).
C CONSTS(31) is z_zf1 in component params_BG (dimensionless).
C CONSTS(32) is z_zr1 in component params_BG (dimensionless).
C CONSTS(33) is z_zf2 in component params_BG (dimensionless).
C CONSTS(34) is z_zr2 in component params_BG (dimensionless).
C ALGBRC(29) is Vm_zf1 in component BG_EAAT2 (volt).
C ALGBRC(40) is I_zf1 in component BG_EAAT2 (fA).
C ALGBRC(32) is mu_zf1 in component BG_EAAT2 (J_per_mol).
C ALGBRC(39) is v_zf1 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(31) is Vm_zr1 in component BG_EAAT2 (volt).
C ALGBRC(42) is I_zr1 in component BG_EAAT2 (fA).
C ALGBRC(34) is mu_zr1 in component BG_EAAT2 (J_per_mol).
C ALGBRC(41) is v_zr1 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(30) is Vm_zf2 in component BG_EAAT2 (volt).
C ALGBRC(50) is I_zf2 in component BG_EAAT2 (fA).
C ALGBRC(33) is mu_zf2 in component BG_EAAT2 (J_per_mol).
C ALGBRC(49) is v_zf2 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(43) is Vm_zr2 in component BG_EAAT2 (volt).
C ALGBRC(52) is I_zr2 in component BG_EAAT2 (fA).
C ALGBRC(44) is mu_zr2 in component BG_EAAT2 (J_per_mol).
C ALGBRC(51) is v_zr2 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(7) is A_f_r1 in component BG_EAAT2 (J_per_mol).
C ALGBRC(19) is v_r1 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(8) is A_r_r1 in component BG_EAAT2 (J_per_mol).
C ALGBRC(9) is A_f_r2 in component BG_EAAT2 (J_per_mol).
C ALGBRC(36) is v_r2 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(35) is A_r_r2 in component BG_EAAT2 (J_per_mol).
C ALGBRC(10) is A_f_r3 in component BG_EAAT2 (J_per_mol).
C ALGBRC(20) is v_r3 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(11) is A_r_r3 in component BG_EAAT2 (J_per_mol).
C ALGBRC(12) is A_f_r4 in component BG_EAAT2 (J_per_mol).
C ALGBRC(46) is v_r4 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(45) is A_r_r4 in component BG_EAAT2 (J_per_mol).
C ALGBRC(13) is A_f_r5 in component BG_EAAT2 (J_per_mol).
C ALGBRC(21) is v_r5 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(14) is A_r_r5 in component BG_EAAT2 (J_per_mol).
C ALGBRC(15) is A_f_r6 in component BG_EAAT2 (J_per_mol).
C ALGBRC(23) is v_r6 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(16) is A_r_r6 in component BG_EAAT2 (J_per_mol).
C ALGBRC(17) is A_f_r7 in component BG_EAAT2 (J_per_mol).
C ALGBRC(22) is v_r7 in component BG_EAAT2 (fmol_per_s).
C ALGBRC(18) is A_r_r7 in component BG_EAAT2 (J_per_mol).
C STATES(1) is q_1 in component BG_EAAT2 (fmol).
C STATES(2) is q_2 in component BG_EAAT2 (fmol).
C STATES(3) is q_3 in component BG_EAAT2 (fmol).
C STATES(4) is q_4 in component BG_EAAT2 (fmol).
C STATES(5) is q_5 in component BG_EAAT2 (fmol).
C STATES(6) is q_6 in component BG_EAAT2 (fmol).
C ALGBRC(53) is Ii in component BG_EAAT2 (fA).
C ALGBRC(27) is I_ss in component BG_EAAT2 (fA).
C CONSTS(35) is nNa in component BG_EAAT2 (dimensionless).
C CONSTS(36) is Nai in component params_BG (mM).
C CONSTS(37) is Nao in component params_BG (mM).
C CONSTS(38) is Glui in component params_BG (mM).
C CONSTS(39) is Gluo in component params_BG (mM).
C CONSTS(40) is Hi in component params_BG (mM).
C CONSTS(41) is Ho in component params_BG (mM).
C CONSTS(42) is Ki in component params_BG (mM).
C CONSTS(43) is Ko in component params_BG (mM).
C CONSTS(44) is V_i in component params_BG (pL).
C CONSTS(45) is V_o in component params_BG (pL).
C STATES(7) is V_E in component params_BG (volt).
C CONSTS(46) is dt in component params_BG (second).
C RATES(1) is d/dt q_1 in component BG_EAAT2 (fmol).
C RATES(2) is d/dt q_2 in component BG_EAAT2 (fmol).
C RATES(3) is d/dt q_3 in component BG_EAAT2 (fmol).
C RATES(4) is d/dt q_4 in component BG_EAAT2 (fmol).
C RATES(5) is d/dt q_5 in component BG_EAAT2 (fmol).
C RATES(6) is d/dt q_6 in component BG_EAAT2 (fmol).
C RATES(7) is d/dt V_E in component params_BG (volt).
C
      SUBROUTINE initConsts(CONSTS, RATES, STATES)
      REAL CONSTS(*), RATES(*), STATES(*)
      CONSTS(1) = 8.31
      CONSTS(2) = 293
      CONSTS(3) = 96485
      CONSTS(4) = 1e-06
      CONSTS(5) = 1e-06
      CONSTS(6) = 1e-06
      CONSTS(7) = 1e-06
      CONSTS(8) = 1e-06
      CONSTS(9) = 1e-06
      CONSTS(10) = 1e-08
      CONSTS(11) = 1e-08
      CONSTS(12) = 1
      CONSTS(13) = 1
      CONSTS(14) = 1
      CONSTS(15) = 1
      CONSTS(16) = 1
      CONSTS(17) = 1
      CONSTS(18) = 1
      CONSTS(19) = 1
      CONSTS(20) = 1
      CONSTS(21) = 1
      CONSTS(22) = 1
      CONSTS(23) = 1
      CONSTS(24) = 1
      CONSTS(25) = 1
      CONSTS(26) = 1
      CONSTS(27) = 1
      CONSTS(28) = 1
      CONSTS(29) = 1
      CONSTS(30) = 1
      CONSTS(31) = 1
      CONSTS(32) = 1
      CONSTS(33) = 1
      CONSTS(34) = 1
      CONSTS(35) = 3
      CONSTS(36) = 20
      CONSTS(37) = 100
      CONSTS(38) = 10e-3
      CONSTS(39) = 1e-12
      CONSTS(40) = 10e-3
      CONSTS(41) = 1e-12
      CONSTS(42) = 10e-3
      CONSTS(43) = 1e-12
      CONSTS(44) = 8.5e5
      CONSTS(45) = 8.5e5
      STATES(7) = -0.05
      CONSTS(46) = 1e-3
      CONSTS(47) =  CONSTS(36)*CONSTS(44)
      CONSTS(62) = 0.00000
      CONSTS(48) =  CONSTS(1)*CONSTS(2)*log( CONSTS(10)*CONSTS(47))
      CONSTS(49) =  CONSTS(37)*CONSTS(45)
      CONSTS(50) =  CONSTS(1)*CONSTS(2)*log( CONSTS(11)*CONSTS(49))
      CONSTS(51) =  CONSTS(38)*CONSTS(44)
      CONSTS(52) =  CONSTS(1)*CONSTS(2)*log( CONSTS(4)*CONSTS(51))
      CONSTS(53) =  CONSTS(39)*CONSTS(45)
      CONSTS(54) =  CONSTS(1)*CONSTS(2)*log( CONSTS(5)*CONSTS(53))
      CONSTS(55) =  CONSTS(42)*CONSTS(44)
      CONSTS(56) =  CONSTS(1)*CONSTS(2)*log( CONSTS(8)*CONSTS(55))
      CONSTS(57) =  CONSTS(43)*CONSTS(45)
      CONSTS(58) =  CONSTS(1)*CONSTS(2)*log( CONSTS(9)*CONSTS(57))
      CONSTS(59) =  CONSTS(40)*CONSTS(44)
      CONSTS(60) =  CONSTS(1)*CONSTS(2)*log( CONSTS(6)*CONSTS(59))
      CONSTS(61) =  CONSTS(41)*CONSTS(45)
      CONSTS(62) =  CONSTS(1)*CONSTS(2)*log( CONSTS(7)*CONSTS(61))
      STATES(1) = CONSTS(13)
      STATES(2) = CONSTS(15)
      STATES(3) = CONSTS(17)
      STATES(4) = CONSTS(19)
      STATES(5) = CONSTS(21)
      STATES(6) = CONSTS(23)
      RETURN
      END
      SUBROUTINE computeRates(VOI, CONSTS,  RATES, STATES, ALGBRC)
      REAL VOI, CONSTS(*), RATES(*), STATES(*), ALGBRC(*)
      RATES(7) = CONSTS(62)
      ALGBRC(4) =  CONSTS(1)*CONSTS(2)*log( CONSTS(18)*STATES(4))
      ALGBRC(13) = ALGBRC(4)+CONSTS(56)
      ALGBRC(5) =  CONSTS(1)*CONSTS(2)*log( CONSTS(20)*STATES(5))
      ALGBRC(14) = ALGBRC(5)+ CONSTS(35)*CONSTS(48)
      ALGBRC(21) =  CONSTS(28)*(EXP(ALGBRC(13)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(14)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(15) = ALGBRC(5)
      ALGBRC(6) =  CONSTS(1)*CONSTS(2)*log( CONSTS(22)*STATES(6))
      ALGBRC(16) = ALGBRC(6)+CONSTS(58)
      ALGBRC(23) =  CONSTS(29)*(EXP(ALGBRC(15)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(16)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(24) = ALGBRC(21) - ALGBRC(23)
      RATES(5) = ALGBRC(24)
      ALGBRC(7) =  CONSTS(35)*CONSTS(50)+ALGBRC(6)
      ALGBRC(1) =  CONSTS(1)*CONSTS(2)*log( CONSTS(12)*STATES(1))
      ALGBRC(8) = ALGBRC(1)
      ALGBRC(19) =  CONSTS(24)*(EXP(ALGBRC(7)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(8)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(25) = ALGBRC(23) - ALGBRC(19)
      RATES(6) = ALGBRC(25)
      ALGBRC(9) = ALGBRC(1)+CONSTS(62)+CONSTS(54)
      ALGBRC(2) =  CONSTS(1)*CONSTS(2)*log( CONSTS(14)*STATES(2))
      ALGBRC(26) = STATES(7)
      ALGBRC(28) = ALGBRC(26)
      ALGBRC(31) = ALGBRC(28)
      ALGBRC(34) =  CONSTS(32)*CONSTS(3)*ALGBRC(31)
      ALGBRC(35) = ALGBRC(2)+ALGBRC(34)
      ALGBRC(36) =  CONSTS(25)*(EXP(ALGBRC(9)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(35)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(17) = ALGBRC(1)
      ALGBRC(18) = ALGBRC(4)
      ALGBRC(22) =  CONSTS(30)*(EXP(ALGBRC(17)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(18)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(37) = (ALGBRC(19) - ALGBRC(36)) - ALGBRC(22)
      RATES(1) = ALGBRC(37)
      ALGBRC(10) = ALGBRC(2)
      ALGBRC(3) =  CONSTS(1)*CONSTS(2)*log( CONSTS(16)*STATES(3))
      ALGBRC(11) = ALGBRC(3)
      ALGBRC(20) =  CONSTS(26)*(EXP(ALGBRC(10)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(11)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(38) = ALGBRC(36) - ALGBRC(20)
      RATES(2) = ALGBRC(38)
      ALGBRC(12) = ALGBRC(3)
      ALGBRC(43) = ALGBRC(28)
      ALGBRC(44) =  CONSTS(34)*CONSTS(3)*ALGBRC(43)
      ALGBRC(45) = ALGBRC(4)+CONSTS(60)+CONSTS(52)+ALGBRC(44)
      ALGBRC(46) =  CONSTS(27)*(EXP(ALGBRC(12)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(45)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(47) = ALGBRC(20) - ALGBRC(46)
      RATES(3) = ALGBRC(47)
      ALGBRC(48) = (ALGBRC(46) - ALGBRC(21))+ALGBRC(22)
      RATES(4) = ALGBRC(48)
      RETURN
      END
      SUBROUTINE computeVariables(VOI, CONSTS, RATES, STATES, ALGBRC)
      REAL VOI, CONSTS(*), RATES(*), STATES(*), ALGBRC(*)
      ALGBRC(4) =  CONSTS(1)*CONSTS(2)*log( CONSTS(18)*STATES(4))
      ALGBRC(13) = ALGBRC(4)+CONSTS(56)
      ALGBRC(5) =  CONSTS(1)*CONSTS(2)*log( CONSTS(20)*STATES(5))
      ALGBRC(14) = ALGBRC(5)+ CONSTS(35)*CONSTS(48)
      ALGBRC(21) =  CONSTS(28)*(EXP(ALGBRC(13)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(14)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(15) = ALGBRC(5)
      ALGBRC(6) =  CONSTS(1)*CONSTS(2)*log( CONSTS(22)*STATES(6))
      ALGBRC(16) = ALGBRC(6)+CONSTS(58)
      ALGBRC(23) =  CONSTS(29)*(EXP(ALGBRC(15)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(16)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(24) = ALGBRC(21) - ALGBRC(23)
      ALGBRC(7) =  CONSTS(35)*CONSTS(50)+ALGBRC(6)
      ALGBRC(1) =  CONSTS(1)*CONSTS(2)*log( CONSTS(12)*STATES(1))
      ALGBRC(8) = ALGBRC(1)
      ALGBRC(19) =  CONSTS(24)*(EXP(ALGBRC(7)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(8)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(25) = ALGBRC(23) - ALGBRC(19)
      ALGBRC(9) = ALGBRC(1)+CONSTS(62)+CONSTS(54)
      ALGBRC(2) =  CONSTS(1)*CONSTS(2)*log( CONSTS(14)*STATES(2))
      ALGBRC(26) = STATES(7)
      ALGBRC(28) = ALGBRC(26)
      ALGBRC(31) = ALGBRC(28)
      ALGBRC(34) =  CONSTS(32)*CONSTS(3)*ALGBRC(31)
      ALGBRC(35) = ALGBRC(2)+ALGBRC(34)
      ALGBRC(36) =  CONSTS(25)*(EXP(ALGBRC(9)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(35)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(17) = ALGBRC(1)
      ALGBRC(18) = ALGBRC(4)
      ALGBRC(22) =  CONSTS(30)*(EXP(ALGBRC(17)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(18)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(37) = (ALGBRC(19) - ALGBRC(36)) - ALGBRC(22)
      ALGBRC(10) = ALGBRC(2)
      ALGBRC(3) =  CONSTS(1)*CONSTS(2)*log( CONSTS(16)*STATES(3))
      ALGBRC(11) = ALGBRC(3)
      ALGBRC(20) =  CONSTS(26)*(EXP(ALGBRC(10)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(11)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(38) = ALGBRC(36) - ALGBRC(20)
      ALGBRC(12) = ALGBRC(3)
      ALGBRC(43) = ALGBRC(28)
      ALGBRC(44) =  CONSTS(34)*CONSTS(3)*ALGBRC(43)
      ALGBRC(45) = ALGBRC(4)+CONSTS(60)+CONSTS(52)+ALGBRC(44)
      ALGBRC(46) =  CONSTS(27)*(EXP(ALGBRC(12)/( CONSTS(1)*CONSTS(2))) - EXP(ALGBRC(45)/( CONSTS(1)*CONSTS(2))))
      ALGBRC(47) = ALGBRC(20) - ALGBRC(46)
      ALGBRC(48) = (ALGBRC(46) - ALGBRC(21))+ALGBRC(22)
      ALGBRC(27) =  2.00000*CONSTS(3)*- ALGBRC(23)
      ALGBRC(29) = ALGBRC(28)
      ALGBRC(30) = ALGBRC(28)
      ALGBRC(32) =  CONSTS(31)*CONSTS(3)*ALGBRC(29)
      ALGBRC(33) =  CONSTS(33)*CONSTS(3)*ALGBRC(30)
      ALGBRC(39) = ALGBRC(36)
      ALGBRC(40) =  CONSTS(31)*CONSTS(3)*ALGBRC(39)
      ALGBRC(41) = ALGBRC(36)
      ALGBRC(42) =  CONSTS(32)*CONSTS(3)*ALGBRC(41)
      ALGBRC(49) = ALGBRC(46)
      ALGBRC(50) =  CONSTS(33)*CONSTS(3)*ALGBRC(49)
      ALGBRC(51) = ALGBRC(46)
      ALGBRC(52) =  CONSTS(34)*CONSTS(3)*ALGBRC(51)
      ALGBRC(53) = ALGBRC(40)+ALGBRC(42)+ALGBRC(50)+ALGBRC(52)
      RETURN
      END
Source
Derived from workspace EAAT2 - The Physics of Physiology at changeset 387de517615b.
Collaboration
To begin collaborating on this work, please use your git client and issue this command:
License
The terms of use/license for this work is unspecified.