/*
   There are a total of 16 entries in the algebraic variable array.
   There are a total of 6 entries in each of the rate and state variable arrays.
   There are a total of 23 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (second).
 * ALGEBRAIC[0] is q_L_B1_init in component environment (fmol).
 * CONSTANTS[0] is q_R_B1_init in component environment (fmol).
 * CONSTANTS[1] is q_Gs_init in component environment (fmol).
 * CONSTANTS[2] is q_LR_B1_init in component environment (fmol).
 * CONSTANTS[3] is q_R_B1Gs_init in component environment (fmol).
 * CONSTANTS[4] is q_LR_B1Gs_init in component environment (fmol).
 * CONSTANTS[5] is stimSt in component environment (second).
 * CONSTANTS[6] is stimDur in component environment (second).
 * CONSTANTS[7] is tR in component environment (second).
 * CONSTANTS[8] is stimMag in component environment (fmol).
 * CONSTANTS[9] is stimHolding in component environment (fmol).
 * CONSTANTS[22] is m in component environment (fmol_per_sec).
 * ALGEBRAIC[1] is q_L_B1 in component environment (fmol).
 * ALGEBRAIC[2] is q_R_B1 in component environment (fmol).
 * ALGEBRAIC[3] is q_Gs in component environment (fmol).
 * ALGEBRAIC[4] is q_LR_B1 in component environment (fmol).
 * ALGEBRAIC[5] is q_R_B1Gs in component environment (fmol).
 * ALGEBRAIC[6] is q_LR_B1Gs in component environment (fmol).
 * STATES[0] is q_L_B1 in component LRGbinding_B1AR (fmol).
 * STATES[1] is q_R_B1 in component LRGbinding_B1AR (fmol).
 * STATES[2] is q_Gs in component LRGbinding_B1AR (fmol).
 * STATES[3] is q_LR_B1 in component LRGbinding_B1AR (fmol).
 * STATES[4] is q_R_B1Gs in component LRGbinding_B1AR (fmol).
 * STATES[5] is q_LR_B1Gs in component LRGbinding_B1AR (fmol).
 * CONSTANTS[10] is kappa_R_C_B1 in component LRGbinding_B1AR_parameters (fmol_per_sec).
 * CONSTANTS[11] is kappa_R_R_B1 in component LRGbinding_B1AR_parameters (fmol_per_sec).
 * CONSTANTS[12] is kappa_R_L_B1 in component LRGbinding_B1AR_parameters (fmol_per_sec).
 * CONSTANTS[13] is K_L_B1 in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[14] is K_R_B1 in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[15] is K_Gs in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[16] is K_LR_B1 in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[17] is K_R_B1Gs in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[18] is K_LR_B1Gs in component LRGbinding_B1AR_parameters (per_fmol).
 * CONSTANTS[19] is R in component constants (J_per_K_per_mol).
 * CONSTANTS[20] is T in component constants (kelvin).
 * ALGEBRAIC[7] is mu_L_B1 in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[8] is mu_R_B1 in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[9] is mu_Gs in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[10] is mu_LR_B1 in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[11] is mu_R_B1Gs in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[12] is mu_LR_B1Gs in component LRGbinding_B1AR (J_per_mol).
 * ALGEBRAIC[13] is v_R_C_B1 in component LRGbinding_B1AR (fmol_per_sec).
 * ALGEBRAIC[14] is v_R_R_B1 in component LRGbinding_B1AR (fmol_per_sec).
 * ALGEBRAIC[15] is v_R_L_B1 in component LRGbinding_B1AR (fmol_per_sec).
 * CONSTANTS[21] is F in component constants (C_per_mol).
 * RATES[0] is d/dt q_L_B1 in component LRGbinding_B1AR (fmol).
 * RATES[1] is d/dt q_R_B1 in component LRGbinding_B1AR (fmol).
 * RATES[2] is d/dt q_Gs in component LRGbinding_B1AR (fmol).
 * RATES[3] is d/dt q_LR_B1 in component LRGbinding_B1AR (fmol).
 * RATES[4] is d/dt q_R_B1Gs in component LRGbinding_B1AR (fmol).
 * RATES[5] is d/dt q_LR_B1Gs in component LRGbinding_B1AR (fmol).
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 0.0004579000;
CONSTANTS[1] = 0.1455400000;
CONSTANTS[2] = 0;
CONSTANTS[3] = 0;
CONSTANTS[4] = 0;
CONSTANTS[5] = 3.1;
CONSTANTS[6] = 0.5e1;
CONSTANTS[7] = 0.3e1;
CONSTANTS[8] = 1e-7;
CONSTANTS[9] = 1e-8;
STATES[0] = 1e-16;
STATES[1] = 1e-16;
STATES[2] = 1e-16;
STATES[3] = 1e-16;
STATES[4] = 1e-16;
STATES[5] = 1e-16;
CONSTANTS[10] = 5573.84;
CONSTANTS[11] = 641.71;
CONSTANTS[12] = 1143.57;
CONSTANTS[13] = 0.885956;
CONSTANTS[14] = 0.834078;
CONSTANTS[15] = 0.18177;
CONSTANTS[16] = 7.24472;
CONSTANTS[17] = 172.108;
CONSTANTS[18] = 2.80863;
CONSTANTS[19] = 8.31;
CONSTANTS[20] = 310;
CONSTANTS[21] = 96485;
CONSTANTS[22] = CONSTANTS[8]/CONSTANTS[7];
}
void
computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[2] = STATES[1]+CONSTANTS[0];
ALGEBRAIC[8] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[14]*ALGEBRAIC[2]);
ALGEBRAIC[3] = STATES[2]+CONSTANTS[1];
ALGEBRAIC[9] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[15]*ALGEBRAIC[3]);
ALGEBRAIC[5] = STATES[4]+CONSTANTS[3];
ALGEBRAIC[11] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[17]*ALGEBRAIC[5]);
ALGEBRAIC[13] =  CONSTANTS[10]*exp((ALGEBRAIC[8]+ALGEBRAIC[9])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[11]/( CONSTANTS[19]*CONSTANTS[20]));
RATES[4] = ALGEBRAIC[13];
ALGEBRAIC[4] = STATES[3]+CONSTANTS[2];
ALGEBRAIC[10] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[16]*ALGEBRAIC[4]);
ALGEBRAIC[6] = STATES[5]+CONSTANTS[4];
ALGEBRAIC[12] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[18]*ALGEBRAIC[6]);
ALGEBRAIC[14] =  CONSTANTS[11]*exp((ALGEBRAIC[10]+ALGEBRAIC[9])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[12]/( CONSTANTS[19]*CONSTANTS[20]));
RATES[2] = - ALGEBRAIC[13] - ALGEBRAIC[14];
RATES[5] = ALGEBRAIC[14];
ALGEBRAIC[0] = (VOI<CONSTANTS[5]&&VOI>CONSTANTS[5] - CONSTANTS[7] ? CONSTANTS[9]+ CONSTANTS[22]*((VOI - CONSTANTS[5])+CONSTANTS[7]) : VOI>=CONSTANTS[5]&&VOI<CONSTANTS[5]+CONSTANTS[6] ? CONSTANTS[8]+CONSTANTS[9] : VOI<CONSTANTS[5]+CONSTANTS[7]+CONSTANTS[6]&&VOI>=CONSTANTS[5]+CONSTANTS[6] ? CONSTANTS[9]+ - CONSTANTS[22]*(((VOI - CONSTANTS[5]) - CONSTANTS[7]) - CONSTANTS[6]) : CONSTANTS[9]);
ALGEBRAIC[1] = STATES[0]+ALGEBRAIC[0];
ALGEBRAIC[7] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[13]*ALGEBRAIC[1]);
ALGEBRAIC[15] =  CONSTANTS[12]*exp((ALGEBRAIC[8]+ALGEBRAIC[7])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[10]/( CONSTANTS[19]*CONSTANTS[20]));
RATES[0] = - ALGEBRAIC[15];
RATES[1] = - ALGEBRAIC[13] - ALGEBRAIC[15];
RATES[3] = - ALGEBRAIC[14]+ALGEBRAIC[15];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[2] = STATES[1]+CONSTANTS[0];
ALGEBRAIC[8] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[14]*ALGEBRAIC[2]);
ALGEBRAIC[3] = STATES[2]+CONSTANTS[1];
ALGEBRAIC[9] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[15]*ALGEBRAIC[3]);
ALGEBRAIC[5] = STATES[4]+CONSTANTS[3];
ALGEBRAIC[11] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[17]*ALGEBRAIC[5]);
ALGEBRAIC[13] =  CONSTANTS[10]*exp((ALGEBRAIC[8]+ALGEBRAIC[9])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[11]/( CONSTANTS[19]*CONSTANTS[20]));
ALGEBRAIC[4] = STATES[3]+CONSTANTS[2];
ALGEBRAIC[10] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[16]*ALGEBRAIC[4]);
ALGEBRAIC[6] = STATES[5]+CONSTANTS[4];
ALGEBRAIC[12] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[18]*ALGEBRAIC[6]);
ALGEBRAIC[14] =  CONSTANTS[11]*exp((ALGEBRAIC[10]+ALGEBRAIC[9])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[12]/( CONSTANTS[19]*CONSTANTS[20]));
ALGEBRAIC[0] = (VOI<CONSTANTS[5]&&VOI>CONSTANTS[5] - CONSTANTS[7] ? CONSTANTS[9]+ CONSTANTS[22]*((VOI - CONSTANTS[5])+CONSTANTS[7]) : VOI>=CONSTANTS[5]&&VOI<CONSTANTS[5]+CONSTANTS[6] ? CONSTANTS[8]+CONSTANTS[9] : VOI<CONSTANTS[5]+CONSTANTS[7]+CONSTANTS[6]&&VOI>=CONSTANTS[5]+CONSTANTS[6] ? CONSTANTS[9]+ - CONSTANTS[22]*(((VOI - CONSTANTS[5]) - CONSTANTS[7]) - CONSTANTS[6]) : CONSTANTS[9]);
ALGEBRAIC[1] = STATES[0]+ALGEBRAIC[0];
ALGEBRAIC[7] =  CONSTANTS[19]*CONSTANTS[20]*log( CONSTANTS[13]*ALGEBRAIC[1]);
ALGEBRAIC[15] =  CONSTANTS[12]*exp((ALGEBRAIC[8]+ALGEBRAIC[7])/( CONSTANTS[19]*CONSTANTS[20])) - exp(ALGEBRAIC[10]/( CONSTANTS[19]*CONSTANTS[20]));
}