Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 13 entries in the algebraic variable array.
There are a total of 4 entries in each of the rate and state variable arrays.
There are a total of 29 entries in the constant variable array.
*/
/*
* STATES[0] is P_Open in component kinetics (dimensionless).
* STATES[1] is P_Closed in component kinetics (dimensionless).
* STATES[2] is P_I1 in component kinetics (dimensionless).
* STATES[3] is P_I2 in component kinetics (dimensionless).
* VOI is time in component environment (ms).
* ALGEBRAIC[1] is current in component stimulus_protocol (nA_per_nF).
* ALGEBRAIC[3] is voltage_out in component environment (mV).
* ALGEBRAIC[4] is transmembranevoltage in component environment (mV).
* ALGEBRAIC[2] is pressure in component environment (mmHg).
* ALGEBRAIC[0] is stretch in component stimulus_protocol (dimensionless).
* CONSTANTS[0] is pressure_stim_offset in component environment (ms).
* CONSTANTS[1] is pressure_stim_period in component environment (ms).
* CONSTANTS[2] is pressure_stim_duration in component environment (ms).
* CONSTANTS[3] is pressure_stim_amplitude in component environment (dimensionless).
* CONSTANTS[4] is current_stim_offset in component environment (ms).
* CONSTANTS[5] is current_stim_period in component environment (ms).
* CONSTANTS[6] is current_stim_duration in component environment (ms).
* CONSTANTS[7] is current_stim_amplitude in component environment (nA_per_nF).
* CONSTANTS[8] is current_stim_end in component environment (ms).
* CONSTANTS[9] is current_N_period_total in component environment (dimensionless).
* CONSTANTS[10] is current_N_period_applied in component environment (dimensionless).
* CONSTANTS[11] is r1 in component kinetics (per_ms).
* CONSTANTS[12] is r3 in component kinetics (per_ms).
* CONSTANTS[13] is r4 in component kinetics (per_ms).
* CONSTANTS[14] is r5 in component kinetics (per_ms).
* CONSTANTS[15] is r6 in component kinetics (per_ms).
* CONSTANTS[16] is r7 in component kinetics (per_ms).
* CONSTANTS[17] is r8 in component kinetics (per_ms).
* CONSTANTS[18] is ce1 in component kinetics (dimensionless).
* CONSTANTS[19] is ce3 in component kinetics (dimensionless).
* CONSTANTS[20] is ce4 in component kinetics (dimensionless).
* CONSTANTS[21] is cm4 in component kinetics (dimensionless).
* CONSTANTS[22] is ce5 in component kinetics (dimensionless).
* CONSTANTS[23] is ce6 in component kinetics (dimensionless).
* CONSTANTS[24] is ce7 in component kinetics (dimensionless).
* CONSTANTS[25] is ce8 in component kinetics (dimensionless).
* CONSTANTS[26] is r2 in component kinetics (per_ms).
* CONSTANTS[27] is ce2 in component kinetics (dimensionless).
* CONSTANTS[28] is cm2 in component kinetics (dimensionless).
* ALGEBRAIC[5] is p_O_I1 in component kinetics (per_ms).
* ALGEBRAIC[6] is p_I1_O in component kinetics (per_ms).
* ALGEBRAIC[7] is p_I1_C in component kinetics (per_ms).
* ALGEBRAIC[8] is p_C_I1 in component kinetics (per_ms).
* ALGEBRAIC[9] is p_C_O in component kinetics (per_ms).
* ALGEBRAIC[10] is p_O_C in component kinetics (per_ms).
* ALGEBRAIC[11] is p_I2_O in component kinetics (per_ms).
* ALGEBRAIC[12] is p_O_I2 in component kinetics (per_ms).
* RATES[0] is d/dt P_Open in component kinetics (dimensionless).
* RATES[1] is d/dt P_Closed in component kinetics (dimensionless).
* RATES[2] is d/dt P_I1 in component kinetics (dimensionless).
* RATES[3] is d/dt P_I2 in component kinetics (dimensionless).
* There are a total of 6 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 0.0;
STATES[1] = 0.3;
STATES[2] = 0.1;
STATES[3] = 0.6;
CONSTANTS[0] = 100;
CONSTANTS[1] = 2000;
CONSTANTS[2] = 5;
CONSTANTS[3] = 1.1;
CONSTANTS[4] = 100;
CONSTANTS[5] = 1000;
CONSTANTS[6] = 500;
CONSTANTS[7] = 80;
CONSTANTS[8] = 999999999999999;
CONSTANTS[9] = 1;
CONSTANTS[10] = 1;
CONSTANTS[11] = 0.02634342;
CONSTANTS[12] = 0.0008000712;
CONSTANTS[13] = 0.008945307;
CONSTANTS[14] = 1.3529515e-5;
CONSTANTS[15] = 6.206403e-5;
CONSTANTS[16] = 6.603723e-6;
CONSTANTS[17] = 0.00079357607;
CONSTANTS[18] = -2.3753126;
CONSTANTS[19] = -5.6010337;
CONSTANTS[20] = 0.70629007;
CONSTANTS[21] = -12.101605;
CONSTANTS[22] = 6.46389;
CONSTANTS[23] = -1.2173947;
CONSTANTS[24] = 8.739162;
CONSTANTS[25] = -3.364573;
CONSTANTS[26] = ( CONSTANTS[11]*CONSTANTS[12]*CONSTANTS[14])/( CONSTANTS[13]*CONSTANTS[15]);
CONSTANTS[27] = ((CONSTANTS[18]+CONSTANTS[19]+CONSTANTS[22]) - CONSTANTS[20]) - CONSTANTS[23];
CONSTANTS[28] = - CONSTANTS[21];
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - - (ALGEBRAIC[5]+ALGEBRAIC[12]+ALGEBRAIC[10])*STATES[0]+ ALGEBRAIC[9]*STATES[1]+ ALGEBRAIC[6]*STATES[2]+ ALGEBRAIC[11]*STATES[3];
resid[1] = RATES[1] - - (ALGEBRAIC[8]+ALGEBRAIC[9])*STATES[1]+ ALGEBRAIC[10]*STATES[0]+ ALGEBRAIC[7]*STATES[2];
resid[2] = RATES[2] - - (ALGEBRAIC[6]+ALGEBRAIC[7])*STATES[2]+ ALGEBRAIC[8]*STATES[1]+ ALGEBRAIC[5]*STATES[0];
resid[3] = RATES[3] - - ALGEBRAIC[11]*STATES[3]+ ALGEBRAIC[12]*STATES[0];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[4] = (ALGEBRAIC[3] - 5.00000)*STATES[0];
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[1] = (CONDVAR[2]>=0.00000&&CONDVAR[3]<0.00000&&CONDVAR[4]<=0.00000&&CONDVAR[5]<0.00000 ? CONSTANTS[7] : 0.00000);
ALGEBRAIC[3] = (ALGEBRAIC[1]/1.00000)*1.00000;
ALGEBRAIC[5] = CONSTANTS[11]*exp(( CONSTANTS[18]*ALGEBRAIC[3])/140.000);
ALGEBRAIC[0] = (CONDVAR[0]>=0.00000&&CONDVAR[1]<=0.00000 ? CONSTANTS[3] : 1.00000);
ALGEBRAIC[2] = 350.000*multi_max(2, 0.00000, ALGEBRAIC[0] - 1.00000);
ALGEBRAIC[6] = CONSTANTS[26]*exp(( CONSTANTS[27]*ALGEBRAIC[3])/140.000+( CONSTANTS[28]*ALGEBRAIC[2])/70.0000);
ALGEBRAIC[7] = CONSTANTS[12]*exp(( CONSTANTS[19]*ALGEBRAIC[3])/140.000);
ALGEBRAIC[8] = CONSTANTS[13]*exp(( CONSTANTS[20]*ALGEBRAIC[3])/140.000+( CONSTANTS[21]*ALGEBRAIC[2])/70.0000);
ALGEBRAIC[9] = CONSTANTS[14]*exp(( CONSTANTS[22]*ALGEBRAIC[3])/140.000);
ALGEBRAIC[10] = CONSTANTS[15]*exp(( CONSTANTS[23]*ALGEBRAIC[3])/140.000);
ALGEBRAIC[11] = CONSTANTS[16]*exp(( (( CONSTANTS[24]*ALGEBRAIC[3])/140.000)*ALGEBRAIC[2])/70.0000);
ALGEBRAIC[12] = CONSTANTS[17]*exp(( CONSTANTS[25]*ALGEBRAIC[3])/140.000);
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
CONDVAR[0] = VOI - CONSTANTS[0];
CONDVAR[1] = (int)(VOI - CONSTANTS[0]) % (int)(CONSTANTS[1]) - CONSTANTS[2];
CONDVAR[2] = VOI - CONSTANTS[4];
CONDVAR[3] = VOI - CONSTANTS[8];
CONDVAR[4] = (int)(VOI - CONSTANTS[4]) % (int)(CONSTANTS[5]) - CONSTANTS[6];
CONDVAR[5] = (int)(VOI - CONSTANTS[4]) % (int)( CONSTANTS[9]*CONSTANTS[5]) - CONSTANTS[10]*CONSTANTS[5];
}
