Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 40 entries in the algebraic variable array.
There are a total of 11 entries in each of the rate and state variable arrays.
There are a total of 24 entries in the constant variable array.
*/
/*
* VOI is t in component environment (second).
* CONSTANTS[0] is R in component environment (J_per_K_per_mol).
* CONSTANTS[1] is T in component environment (kelvin).
* CONSTANTS[2] is F in component environment (C_per_mol).
* CONSTANTS[3] is C_m in component environment (fF).
* STATES[0] is q_Ca_o in component environment (fmol).
* STATES[1] is q_Ca_i in component environment (fmol).
* STATES[2] is q_Na_o in component environment (fmol).
* STATES[3] is q_Na_i in component environment (fmol).
* STATES[4] is q_P1_NCX in component environment (fmol).
* STATES[5] is q_P2_NCX in component environment (fmol).
* STATES[6] is q_P3_NCX in component environment (fmol).
* STATES[7] is q_P4_NCX in component environment (fmol).
* STATES[8] is q_P5_NCX in component environment (fmol).
* STATES[9] is q_P6_NCX in component environment (fmol).
* ALGEBRAIC[29] is v_Ca_o_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[30] is v_Ca_i_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[31] is v_Na_o_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[32] is v_Na_i_NCX in component NCX (fmol_per_sec).
* STATES[10] is q_mem in component environment (fC).
* ALGEBRAIC[39] is I_mem_NCX in component NCX (fA).
* CONSTANTS[4] is kappa_1_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[5] is kappa_2_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[6] is kappa_3_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[7] is kappa_4_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[8] is kappa_5_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[9] is kappa_6_NCX in component NCX_parameters (fmol_per_sec).
* CONSTANTS[10] is K_1_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[11] is K_2_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[12] is K_3_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[13] is K_4_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[14] is K_5_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[15] is K_6_NCX in component NCX_parameters (per_fmol).
* CONSTANTS[16] is K_Na_i in component NCX_parameters (per_fmol).
* CONSTANTS[17] is K_Ca_i in component NCX_parameters (per_fmol).
* CONSTANTS[18] is K_Na_o in component NCX_parameters (per_fmol).
* CONSTANTS[19] is K_Ca_o in component NCX_parameters (per_fmol).
* CONSTANTS[20] is zf_NCX in component NCX_parameters (dimensionless).
* CONSTANTS[21] is zr_NCX in component NCX_parameters (dimensionless).
* CONSTANTS[22] is nNa_o_NCX in component NCX_parameters (dimensionless).
* CONSTANTS[23] is nNa_i_NCX in component NCX_parameters (dimensionless).
* ALGEBRAIC[1] is mu_Ca_o in component NCX (J_per_mol).
* ALGEBRAIC[2] is mu_Ca_i in component NCX (J_per_mol).
* ALGEBRAIC[3] is mu_Na_o in component NCX (J_per_mol).
* ALGEBRAIC[4] is mu_Na_i in component NCX (J_per_mol).
* ALGEBRAIC[5] is mu_P1_NCX in component NCX (J_per_mol).
* ALGEBRAIC[6] is mu_P2_NCX in component NCX (J_per_mol).
* ALGEBRAIC[7] is mu_P3_NCX in component NCX (J_per_mol).
* ALGEBRAIC[8] is mu_P4_NCX in component NCX (J_per_mol).
* ALGEBRAIC[9] is mu_P5_NCX in component NCX (J_per_mol).
* ALGEBRAIC[10] is mu_P6_NCX in component NCX (J_per_mol).
* ALGEBRAIC[33] is v_P1_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[34] is v_P2_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[35] is v_P3_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[36] is v_P4_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[37] is v_P5_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[38] is v_P6_NCX in component NCX (fmol_per_sec).
* ALGEBRAIC[11] is Af_r1 in component NCX (J_per_mol).
* ALGEBRAIC[17] is Ar_r1 in component NCX (J_per_mol).
* ALGEBRAIC[23] is v_r1 in component NCX (fmol_per_sec).
* ALGEBRAIC[12] is Af_r2 in component NCX (J_per_mol).
* ALGEBRAIC[18] is Ar_r2 in component NCX (J_per_mol).
* ALGEBRAIC[24] is v_r2 in component NCX (fmol_per_sec).
* ALGEBRAIC[13] is Af_r3 in component NCX (J_per_mol).
* ALGEBRAIC[19] is Ar_r3 in component NCX (J_per_mol).
* ALGEBRAIC[25] is v_r3 in component NCX (fmol_per_sec).
* ALGEBRAIC[14] is Af_r4 in component NCX (J_per_mol).
* ALGEBRAIC[20] is Ar_r4 in component NCX (J_per_mol).
* ALGEBRAIC[26] is v_r4 in component NCX (fmol_per_sec).
* ALGEBRAIC[15] is Af_r5 in component NCX (J_per_mol).
* ALGEBRAIC[21] is Ar_r5 in component NCX (J_per_mol).
* ALGEBRAIC[27] is v_r5 in component NCX (fmol_per_sec).
* ALGEBRAIC[16] is Af_r6 in component NCX (J_per_mol).
* ALGEBRAIC[22] is Ar_r6 in component NCX (J_per_mol).
* ALGEBRAIC[28] is v_r6 in component NCX (fmol_per_sec).
* ALGEBRAIC[0] is V_mem in component NCX (volt).
* RATES[0] is d/dt q_Ca_o in component environment (fmol).
* RATES[1] is d/dt q_Ca_i in component environment (fmol).
* RATES[2] is d/dt q_Na_o in component environment (fmol).
* RATES[3] is d/dt q_Na_i in component environment (fmol).
* RATES[10] is d/dt q_mem in component environment (fC).
* RATES[4] is d/dt q_P1_NCX in component environment (fmol).
* RATES[5] is d/dt q_P2_NCX in component environment (fmol).
* RATES[6] is d/dt q_P3_NCX in component environment (fmol).
* RATES[7] is d/dt q_P4_NCX in component environment (fmol).
* RATES[8] is d/dt q_P5_NCX in component environment (fmol).
* RATES[9] is d/dt q_P6_NCX in component environment (fmol).
* There are a total of 0 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 8.314;
CONSTANTS[1] = 310;
CONSTANTS[2] = 96485;
CONSTANTS[3] = 153400;
STATES[0] = 9.3276;
STATES[1] = 0.00456;
STATES[2] = 725.48;
STATES[3] = 380;
STATES[4] = 0.000103509;
STATES[5] = 0.000103509;
STATES[6] = 0.000103509;
STATES[7] = 0.000103509;
STATES[8] = 0.000103509;
STATES[9] = 0.000103509;
STATES[10] = -13039;
CONSTANTS[4] = 525492;
CONSTANTS[5] = 1.83708e+07;
CONSTANTS[6] = 622.474;
CONSTANTS[7] = 1.83708e+07;
CONSTANTS[8] = 525492;
CONSTANTS[9] = 0.46643;
CONSTANTS[10] = 2.32992e+08;
CONSTANTS[11] = 49.928;
CONSTANTS[12] = 200100;
CONSTANTS[13] = 1.8218e+06;
CONSTANTS[14] = 8402.68;
CONSTANTS[15] = 759.356;
CONSTANTS[16] = 0.00837005;
CONSTANTS[17] = 2.19798;
CONSTANTS[18] = 0.25859;
CONSTANTS[19] = 1470.79;
CONSTANTS[20] = -0.55679;
CONSTANTS[21] = 0.44321;
CONSTANTS[22] = 3;
CONSTANTS[23] = 3;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
RATES[10] = 0.1001;
RATES[4] = 0.1001;
RATES[5] = 0.1001;
RATES[6] = 0.1001;
RATES[7] = 0.1001;
RATES[8] = 0.1001;
RATES[9] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - ALGEBRAIC[29];
resid[1] = RATES[1] - ALGEBRAIC[30];
resid[2] = RATES[2] - ALGEBRAIC[31];
resid[3] = RATES[3] - ALGEBRAIC[32];
resid[4] = RATES[10] - ALGEBRAIC[39];
resid[5] = RATES[4] - ALGEBRAIC[33];
resid[6] = RATES[5] - ALGEBRAIC[34];
resid[7] = RATES[6] - ALGEBRAIC[35];
resid[8] = RATES[7] - ALGEBRAIC[36];
resid[9] = RATES[8] - ALGEBRAIC[37];
resid[10] = RATES[9] - ALGEBRAIC[38];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[8] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[13]*STATES[7]);
ALGEBRAIC[14] = ALGEBRAIC[8];
ALGEBRAIC[1] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[19]*STATES[0]);
ALGEBRAIC[9] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[14]*STATES[8]);
ALGEBRAIC[20] = ALGEBRAIC[9]+ALGEBRAIC[1];
ALGEBRAIC[26] = CONSTANTS[7]*(exp(ALGEBRAIC[14]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[20]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[29] = ALGEBRAIC[26];
ALGEBRAIC[2] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[17]*STATES[1]);
ALGEBRAIC[6] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[11]*STATES[5]);
ALGEBRAIC[12] = ALGEBRAIC[6]+ALGEBRAIC[2];
ALGEBRAIC[7] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[12]*STATES[6]);
ALGEBRAIC[18] = ALGEBRAIC[7];
ALGEBRAIC[24] = CONSTANTS[5]*(exp(ALGEBRAIC[12]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[18]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[30] = - ALGEBRAIC[24];
ALGEBRAIC[3] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[18]*STATES[2]);
ALGEBRAIC[15] = ALGEBRAIC[9]+ CONSTANTS[22]*ALGEBRAIC[3];
ALGEBRAIC[10] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[15]*STATES[9]);
ALGEBRAIC[21] = ALGEBRAIC[10];
ALGEBRAIC[27] = CONSTANTS[8]*(exp(ALGEBRAIC[15]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[21]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[31] = - CONSTANTS[22]*ALGEBRAIC[27];
ALGEBRAIC[5] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[10]*STATES[4]);
ALGEBRAIC[11] = ALGEBRAIC[5];
ALGEBRAIC[4] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[16]*STATES[3]);
ALGEBRAIC[17] = CONSTANTS[23]*ALGEBRAIC[4]+ALGEBRAIC[6];
ALGEBRAIC[23] = CONSTANTS[4]*(exp(ALGEBRAIC[11]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[17]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[32] = CONSTANTS[23]*ALGEBRAIC[23];
ALGEBRAIC[0] = STATES[10]/CONSTANTS[3];
ALGEBRAIC[16] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[15]*STATES[9])+ CONSTANTS[20]*CONSTANTS[2]*ALGEBRAIC[0];
ALGEBRAIC[22] = CONSTANTS[0]*CONSTANTS[1]*log( CONSTANTS[10]*STATES[4])+ CONSTANTS[21]*CONSTANTS[2]*ALGEBRAIC[0];
ALGEBRAIC[28] = CONSTANTS[9]*(exp(ALGEBRAIC[16]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[22]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[33] = ALGEBRAIC[28] - ALGEBRAIC[23];
ALGEBRAIC[34] = ALGEBRAIC[23] - ALGEBRAIC[24];
ALGEBRAIC[13] = ALGEBRAIC[7];
ALGEBRAIC[19] = ALGEBRAIC[8];
ALGEBRAIC[25] = CONSTANTS[6]*(exp(ALGEBRAIC[13]/( CONSTANTS[0]*CONSTANTS[1])) - exp(ALGEBRAIC[19]/( CONSTANTS[0]*CONSTANTS[1])));
ALGEBRAIC[35] = ALGEBRAIC[24] - ALGEBRAIC[25];
ALGEBRAIC[36] = - ALGEBRAIC[26]+ALGEBRAIC[25];
ALGEBRAIC[37] = - ALGEBRAIC[27]+ALGEBRAIC[26];
ALGEBRAIC[38] = - ALGEBRAIC[28]+ALGEBRAIC[27];
ALGEBRAIC[39] = CONSTANTS[2]*( - CONSTANTS[20]*ALGEBRAIC[28]+ CONSTANTS[21]*ALGEBRAIC[28]);
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
SI[6] = 1.0;
SI[7] = 1.0;
SI[8] = 1.0;
SI[9] = 1.0;
SI[10] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}
