Generated Code
The following is matlab code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
function [VOI, STATES, ALGEBRAIC, CONSTANTS] = mainFunction()
% This is the "main function". In Matlab, things work best if you rename this function to match the filename.
[VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel();
end
function [algebraicVariableCount] = getAlgebraicVariableCount()
% Used later when setting a global variable with the number of algebraic variables.
% Note: This is not the "main method".
algebraicVariableCount =29;
end
% There are a total of 15 entries in each of the rate and state variable arrays.
% There are a total of 46 entries in the constant variable array.
%
function [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel()
% Create ALGEBRAIC of correct size
global algebraicVariableCount; algebraicVariableCount = getAlgebraicVariableCount();
% Initialise constants and state variables
[INIT_STATES, CONSTANTS] = initConsts;
% Set timespan to solve over
tspan = [0, 10];
% Set numerical accuracy options for ODE solver
options = odeset('RelTol', 1e-06, 'AbsTol', 1e-06, 'MaxStep', 1);
% Solve model with ODE solver
[VOI, STATES] = ode15s(@(VOI, STATES)computeRates(VOI, STATES, CONSTANTS), tspan, INIT_STATES, options);
% Compute algebraic variables
[RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS);
ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI);
% Plot state variables against variable of integration
[LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends();
figure();
plot(VOI, STATES);
xlabel(LEGEND_VOI);
l = legend(LEGEND_STATES);
set(l,'Interpreter','none');
end
function [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends()
LEGEND_STATES = ''; LEGEND_ALGEBRAIC = ''; LEGEND_VOI = ''; LEGEND_CONSTANTS = '';
LEGEND_VOI = strpad('time in component environment (minute)');
LEGEND_CONSTANTS(:,1) = strpad('k1 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,2) = strpad('kn1 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,3) = strpad('k2 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,4) = strpad('kn2 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,5) = strpad('k2_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,6) = strpad('k3_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,7) = strpad('kn3_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,8) = strpad('k4 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,9) = strpad('k5 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,10) = strpad('k6 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,11) = strpad('k7 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,12) = strpad('kn7 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,13) = strpad('k8 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,14) = strpad('kn8 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,15) = strpad('k8_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,16) = strpad('k9 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,17) = strpad('kn9 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,18) = strpad('k9_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,19) = strpad('k10 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,20) = strpad('k11 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,21) = strpad('k12 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,22) = strpad('k13 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,23) = strpad('k14 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,24) = strpad('k14_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,25) = strpad('k15 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,26) = strpad('k16 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,27) = strpad('k17 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,28) = strpad('k18 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,29) = strpad('kn18 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,30) = strpad('k20 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,31) = strpad('k21 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,32) = strpad('k22 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,33) = strpad('k23 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,34) = strpad('kn23 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,35) = strpad('kPlk1 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,36) = strpad('kPlk1_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,37) = strpad('kctak1 in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,38) = strpad('kctak1_ in component rate_constants (first_order_rate_constant)');
LEGEND_CONSTANTS(:,39) = strpad('kex in component rate_constants (first_order_rate_constant)');
LEGEND_STATES(:,1) = strpad('Chk1P in component Chk1P (dimensionless)');
LEGEND_ALGEBRAIC(:,12) = strpad('V_n1 in component V_n1 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,8) = strpad('V_1 in component V_1 (first_order_rate_constant)');
LEGEND_STATES(:,2) = strpad('Rad3 in component Rad3 (dimensionless)');
LEGEND_CONSTANTS(:,42) = strpad('V_4 in component V_4 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,2) = strpad('V_5 in component V_5 (first_order_rate_constant)');
LEGEND_STATES(:,3) = strpad('p53 in component p53 (dimensionless)');
LEGEND_CONSTANTS(:,43) = strpad('V_10 in component V_10 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,3) = strpad('V_11 in component V_11 (first_order_rate_constant)');
LEGEND_STATES(:,4) = strpad('preMPF in component preMPF (dimensionless)');
LEGEND_ALGEBRAIC(:,13) = strpad('V_14 in component V_14 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,9) = strpad('V_n9 in component V_n9 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,4) = strpad('V_9 in component V_9 (first_order_rate_constant)');
LEGEND_STATES(:,5) = strpad('MPF in component MPF (dimensionless)');
LEGEND_ALGEBRAIC(:,27) = strpad('V_n23 in component V_n23 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,22) = strpad('V_23 in component V_23 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,14) = strpad('V_15 in component V_15 (first_order_rate_constant)');
LEGEND_STATES(:,6) = strpad('p21 in component p21 (dimensionless)');
LEGEND_CONSTANTS(:,44) = strpad('V_21 in component V_21 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,17) = strpad('V_20 in component V_20 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,19) = strpad('V_22 in component V_22 (first_order_rate_constant)');
LEGEND_STATES(:,7) = strpad('p21_MPF in component p21_MPF (dimensionless)');
LEGEND_STATES(:,8) = strpad('iCdc25 in component iCdc25 (dimensionless)');
LEGEND_ALGEBRAIC(:,28) = strpad('V_n7 in component V_n7 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,20) = strpad('V_n3_ in component V_n3_ (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,23) = strpad('V_7 in component V_7 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,15) = strpad('V_2_ in component V_2_ (first_order_rate_constant)');
LEGEND_CONSTANTS(:,40) = strpad('V_in in component V_in (first_order_rate_constant)');
LEGEND_STATES(:,9) = strpad('iCdc25Ps216 in component iCdc25Ps216 (dimensionless)');
LEGEND_ALGEBRAIC(:,24) = strpad('V_n18 in component V_n18 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,21) = strpad('V_18 in component V_18 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,18) = strpad('V_3_ in component V_3_ (first_order_rate_constant)');
LEGEND_STATES(:,10) = strpad('iCdc25Ps216_protein1433 in component iCdc25Ps216_protein1433 (dimensionless)');
LEGEND_ALGEBRAIC(:,25) = strpad('V_ex in component V_ex (first_order_rate_constant)');
LEGEND_STATES(:,11) = strpad('aCdc25 in component aCdc25 (dimensionless)');
LEGEND_ALGEBRAIC(:,10) = strpad('V_n2 in component V_n2 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,5) = strpad('V_2 in component V_2 (first_order_rate_constant)');
LEGEND_STATES(:,12) = strpad('aCdc25Ps216 in component aCdc25Ps216 (dimensionless)');
LEGEND_STATES(:,13) = strpad('protein1433 in component protein1433 (dimensionless)');
LEGEND_ALGEBRAIC(:,26) = strpad('V_6 in component V_6 (first_order_rate_constant)');
LEGEND_CONSTANTS(:,45) = strpad('V_13 in component V_13 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,29) = strpad('V_12 in component V_12 (first_order_rate_constant)');
LEGEND_STATES(:,14) = strpad('Wee1 in component Wee1 (dimensionless)');
LEGEND_CONSTANTS(:,46) = strpad('V_16 in component V_16 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,11) = strpad('V_n8 in component V_n8 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,6) = strpad('V_8 in component V_8 (first_order_rate_constant)');
LEGEND_STATES(:,15) = strpad('Wee1P in component Wee1P (dimensionless)');
LEGEND_ALGEBRAIC(:,16) = strpad('V_17 in component V_17 (first_order_rate_constant)');
LEGEND_ALGEBRAIC(:,7) = strpad('aCdc25_T in component aCdc25_T (dimensionless)');
LEGEND_ALGEBRAIC(:,1) = strpad('Chk1 in component V_1 (dimensionless)');
LEGEND_CONSTANTS(:,41) = strpad('Chk1_T in component V_1 (dimensionless)');
LEGEND_RATES(:,1) = strpad('d/dt Chk1P in component Chk1P (dimensionless)');
LEGEND_RATES(:,2) = strpad('d/dt Rad3 in component Rad3 (dimensionless)');
LEGEND_RATES(:,3) = strpad('d/dt p53 in component p53 (dimensionless)');
LEGEND_RATES(:,4) = strpad('d/dt preMPF in component preMPF (dimensionless)');
LEGEND_RATES(:,5) = strpad('d/dt MPF in component MPF (dimensionless)');
LEGEND_RATES(:,6) = strpad('d/dt p21 in component p21 (dimensionless)');
LEGEND_RATES(:,7) = strpad('d/dt p21_MPF in component p21_MPF (dimensionless)');
LEGEND_RATES(:,8) = strpad('d/dt iCdc25 in component iCdc25 (dimensionless)');
LEGEND_RATES(:,9) = strpad('d/dt iCdc25Ps216 in component iCdc25Ps216 (dimensionless)');
LEGEND_RATES(:,10) = strpad('d/dt iCdc25Ps216_protein1433 in component iCdc25Ps216_protein1433 (dimensionless)');
LEGEND_RATES(:,11) = strpad('d/dt aCdc25 in component aCdc25 (dimensionless)');
LEGEND_RATES(:,12) = strpad('d/dt aCdc25Ps216 in component aCdc25Ps216 (dimensionless)');
LEGEND_RATES(:,13) = strpad('d/dt protein1433 in component protein1433 (dimensionless)');
LEGEND_RATES(:,14) = strpad('d/dt Wee1 in component Wee1 (dimensionless)');
LEGEND_RATES(:,15) = strpad('d/dt Wee1P in component Wee1P (dimensionless)');
LEGEND_STATES = LEGEND_STATES';
LEGEND_ALGEBRAIC = LEGEND_ALGEBRAIC';
LEGEND_RATES = LEGEND_RATES';
LEGEND_CONSTANTS = LEGEND_CONSTANTS';
end
function [STATES, CONSTANTS] = initConsts()
VOI = 0; CONSTANTS = []; STATES = []; ALGEBRAIC = [];
CONSTANTS(:,1) = 1;
CONSTANTS(:,2) = 10;
CONSTANTS(:,3) = 0.1;
CONSTANTS(:,4) = 0.01;
CONSTANTS(:,5) = 0.1;
CONSTANTS(:,6) = 100;
CONSTANTS(:,7) = 0;
CONSTANTS(:,8) = 0;
CONSTANTS(:,9) = 1;
CONSTANTS(:,10) = 0.01;
CONSTANTS(:,11) = 1;
CONSTANTS(:,12) = 0.01;
CONSTANTS(:,13) = 0.1;
CONSTANTS(:,14) = 0.01;
CONSTANTS(:,15) = 0;
CONSTANTS(:,16) = 1;
CONSTANTS(:,17) = 1;
CONSTANTS(:,18) = 0;
CONSTANTS(:,19) = 0;
CONSTANTS(:,20) = 1;
CONSTANTS(:,21) = 0.1;
CONSTANTS(:,22) = 1;
CONSTANTS(:,23) = 0.0005;
CONSTANTS(:,24) = 1;
CONSTANTS(:,25) = 0.01;
CONSTANTS(:,26) = 0.0002;
CONSTANTS(:,27) = 0.1;
CONSTANTS(:,28) = 1;
CONSTANTS(:,29) = 0.01;
CONSTANTS(:,30) = 0.1;
CONSTANTS(:,31) = 0.01;
CONSTANTS(:,32) = 0.1;
CONSTANTS(:,33) = 0.1;
CONSTANTS(:,34) = 1;
CONSTANTS(:,35) = 0;
CONSTANTS(:,36) = 0;
CONSTANTS(:,37) = 0;
CONSTANTS(:,38) = 0;
CONSTANTS(:,39) = 1;
STATES(:,1) = 0.000001;
STATES(:,2) = 0;
STATES(:,3) = 0;
STATES(:,4) = 0.000001;
STATES(:,5) = 0.00000001;
STATES(:,6) = 0;
STATES(:,7) = 0;
STATES(:,8) = 0.000001;
CONSTANTS(:,40) = 0.00001;
STATES(:,9) = 0.00002;
STATES(:,10) = 0.03;
STATES(:,11) = 0.000001;
STATES(:,12) = 0;
STATES(:,13) = 2;
STATES(:,14) = 0.001;
STATES(:,15) = 0;
CONSTANTS(:,41) = 1;
CONSTANTS(:,42) = CONSTANTS(:,8);
CONSTANTS(:,43) = CONSTANTS(:,19);
CONSTANTS(:,44) = CONSTANTS(:,31);
CONSTANTS(:,45) = CONSTANTS(:,22);
CONSTANTS(:,46) = CONSTANTS(:,26);
if (isempty(STATES)), warning('Initial values for states not set');, end
end
function [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS)
global algebraicVariableCount;
statesSize = size(STATES);
statesColumnCount = statesSize(2);
if ( statesColumnCount == 1)
STATES = STATES';
ALGEBRAIC = zeros(1, algebraicVariableCount);
utilOnes = 1;
else
statesRowCount = statesSize(1);
ALGEBRAIC = zeros(statesRowCount, algebraicVariableCount);
RATES = zeros(statesRowCount, statesColumnCount);
utilOnes = ones(statesRowCount, 1);
end
ALGEBRAIC(:,2) = CONSTANTS(:,9).*STATES(:,2);
RATES(:,2) = CONSTANTS(:,42) - ALGEBRAIC(:,2);
ALGEBRAIC(:,3) = CONSTANTS(:,20).*STATES(:,3);
RATES(:,3) = CONSTANTS(:,43) - ALGEBRAIC(:,3);
ALGEBRAIC(:,11) = CONSTANTS(:,14).*STATES(:,15);
ALGEBRAIC(:,6) = CONSTANTS(:,13).*STATES(:,5).*STATES(:,14)+ CONSTANTS(:,15).*STATES(:,14);
RATES(:,14) = (CONSTANTS(:,46)+ALGEBRAIC(:,11)) - ALGEBRAIC(:,6);
ALGEBRAIC(:,12) = CONSTANTS(:,2).*STATES(:,1);
ALGEBRAIC(:,1) = CONSTANTS(:,41) - STATES(:,1);
ALGEBRAIC(:,8) = CONSTANTS(:,1).*ALGEBRAIC(:,1).*STATES(:,2);
RATES(:,1) = ALGEBRAIC(:,8) - ALGEBRAIC(:,12);
ALGEBRAIC(:,13) = (CONSTANTS(:,23)./(1.00000+ CONSTANTS(:,24).*STATES(:,3))).*1.00000;
ALGEBRAIC(:,9) = CONSTANTS(:,17).*STATES(:,5).*STATES(:,14);
ALGEBRAIC(:,4) = CONSTANTS(:,16).*(STATES(:,11)+STATES(:,12)).*STATES(:,4)+ CONSTANTS(:,18).*STATES(:,4);
RATES(:,4) = (ALGEBRAIC(:,13)+ALGEBRAIC(:,9)) - ALGEBRAIC(:,4);
ALGEBRAIC(:,16) = CONSTANTS(:,27).*STATES(:,15);
RATES(:,15) = ALGEBRAIC(:,6) - (ALGEBRAIC(:,11)+ALGEBRAIC(:,16));
ALGEBRAIC(:,15) = CONSTANTS(:,5).*STATES(:,1).*STATES(:,8)+ CONSTANTS(:,38).*STATES(:,8);
ALGEBRAIC(:,24) = CONSTANTS(:,29).*STATES(:,12);
ALGEBRAIC(:,21) = CONSTANTS(:,28).*STATES(:,5).*STATES(:,9)+ CONSTANTS(:,36).*STATES(:,9);
ALGEBRAIC(:,18) = CONSTANTS(:,6).*STATES(:,9).*STATES(:,13);
RATES(:,9) = (ALGEBRAIC(:,15)+ALGEBRAIC(:,24)) - (ALGEBRAIC(:,21)+ALGEBRAIC(:,18));
ALGEBRAIC(:,20) = CONSTANTS(:,7).*STATES(:,10);
ALGEBRAIC(:,25) = CONSTANTS(:,39).*STATES(:,10);
RATES(:,10) = ALGEBRAIC(:,18) - (ALGEBRAIC(:,20)+ALGEBRAIC(:,25));
ALGEBRAIC(:,10) = CONSTANTS(:,4).*STATES(:,12);
ALGEBRAIC(:,5) = CONSTANTS(:,3).*STATES(:,1).*STATES(:,11)+ CONSTANTS(:,37).*STATES(:,11);
RATES(:,12) = (ALGEBRAIC(:,5)+ALGEBRAIC(:,21)) - (ALGEBRAIC(:,10)+ALGEBRAIC(:,24));
ALGEBRAIC(:,27) = CONSTANTS(:,34).*STATES(:,7);
ALGEBRAIC(:,22) = CONSTANTS(:,33).*STATES(:,5).*STATES(:,6);
ALGEBRAIC(:,14) = CONSTANTS(:,25).*power(STATES(:,5), 2.00000);
RATES(:,5) = (ALGEBRAIC(:,4)+ALGEBRAIC(:,27)) - (ALGEBRAIC(:,9)+ALGEBRAIC(:,22)+ALGEBRAIC(:,14));
ALGEBRAIC(:,17) = CONSTANTS(:,30).*STATES(:,3);
ALGEBRAIC(:,19) = CONSTANTS(:,32).*STATES(:,6);
RATES(:,6) = (ALGEBRAIC(:,17)+CONSTANTS(:,44)+ALGEBRAIC(:,27)) - (ALGEBRAIC(:,19)+ALGEBRAIC(:,22));
RATES(:,7) = ALGEBRAIC(:,22) - ALGEBRAIC(:,27);
ALGEBRAIC(:,28) = CONSTANTS(:,12).*STATES(:,11);
ALGEBRAIC(:,23) = CONSTANTS(:,11).*STATES(:,5).*STATES(:,8)+ CONSTANTS(:,35).*STATES(:,8);
RATES(:,8) = (ALGEBRAIC(:,28)+ALGEBRAIC(:,20)+CONSTANTS(:,40)) - (ALGEBRAIC(:,23)+ALGEBRAIC(:,15));
RATES(:,11) = (ALGEBRAIC(:,23)+ALGEBRAIC(:,10)) - (ALGEBRAIC(:,28)+ALGEBRAIC(:,5));
ALGEBRAIC(:,26) = CONSTANTS(:,10).*STATES(:,3);
ALGEBRAIC(:,29) = CONSTANTS(:,21).*STATES(:,13);
RATES(:,13) = (ALGEBRAIC(:,26)+CONSTANTS(:,45)+ALGEBRAIC(:,20)) - (ALGEBRAIC(:,18)+ALGEBRAIC(:,29));
RATES = RATES';
end
% Calculate algebraic variables
function ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI)
statesSize = size(STATES);
statesColumnCount = statesSize(2);
if ( statesColumnCount == 1)
STATES = STATES';
utilOnes = 1;
else
statesRowCount = statesSize(1);
utilOnes = ones(statesRowCount, 1);
end
ALGEBRAIC(:,2) = CONSTANTS(:,9).*STATES(:,2);
ALGEBRAIC(:,3) = CONSTANTS(:,20).*STATES(:,3);
ALGEBRAIC(:,11) = CONSTANTS(:,14).*STATES(:,15);
ALGEBRAIC(:,6) = CONSTANTS(:,13).*STATES(:,5).*STATES(:,14)+ CONSTANTS(:,15).*STATES(:,14);
ALGEBRAIC(:,12) = CONSTANTS(:,2).*STATES(:,1);
ALGEBRAIC(:,1) = CONSTANTS(:,41) - STATES(:,1);
ALGEBRAIC(:,8) = CONSTANTS(:,1).*ALGEBRAIC(:,1).*STATES(:,2);
ALGEBRAIC(:,13) = (CONSTANTS(:,23)./(1.00000+ CONSTANTS(:,24).*STATES(:,3))).*1.00000;
ALGEBRAIC(:,9) = CONSTANTS(:,17).*STATES(:,5).*STATES(:,14);
ALGEBRAIC(:,4) = CONSTANTS(:,16).*(STATES(:,11)+STATES(:,12)).*STATES(:,4)+ CONSTANTS(:,18).*STATES(:,4);
ALGEBRAIC(:,16) = CONSTANTS(:,27).*STATES(:,15);
ALGEBRAIC(:,15) = CONSTANTS(:,5).*STATES(:,1).*STATES(:,8)+ CONSTANTS(:,38).*STATES(:,8);
ALGEBRAIC(:,24) = CONSTANTS(:,29).*STATES(:,12);
ALGEBRAIC(:,21) = CONSTANTS(:,28).*STATES(:,5).*STATES(:,9)+ CONSTANTS(:,36).*STATES(:,9);
ALGEBRAIC(:,18) = CONSTANTS(:,6).*STATES(:,9).*STATES(:,13);
ALGEBRAIC(:,20) = CONSTANTS(:,7).*STATES(:,10);
ALGEBRAIC(:,25) = CONSTANTS(:,39).*STATES(:,10);
ALGEBRAIC(:,10) = CONSTANTS(:,4).*STATES(:,12);
ALGEBRAIC(:,5) = CONSTANTS(:,3).*STATES(:,1).*STATES(:,11)+ CONSTANTS(:,37).*STATES(:,11);
ALGEBRAIC(:,27) = CONSTANTS(:,34).*STATES(:,7);
ALGEBRAIC(:,22) = CONSTANTS(:,33).*STATES(:,5).*STATES(:,6);
ALGEBRAIC(:,14) = CONSTANTS(:,25).*power(STATES(:,5), 2.00000);
ALGEBRAIC(:,17) = CONSTANTS(:,30).*STATES(:,3);
ALGEBRAIC(:,19) = CONSTANTS(:,32).*STATES(:,6);
ALGEBRAIC(:,28) = CONSTANTS(:,12).*STATES(:,11);
ALGEBRAIC(:,23) = CONSTANTS(:,11).*STATES(:,5).*STATES(:,8)+ CONSTANTS(:,35).*STATES(:,8);
ALGEBRAIC(:,26) = CONSTANTS(:,10).*STATES(:,3);
ALGEBRAIC(:,29) = CONSTANTS(:,21).*STATES(:,13);
ALGEBRAIC(:,7) = STATES(:,11)+STATES(:,12);
end
% Pad out or shorten strings to a set length
function strout = strpad(strin)
req_length = 160;
insize = size(strin,2);
if insize > req_length
strout = strin(1:req_length);
else
strout = [strin, blanks(req_length - insize)];
end
end