Generated Code
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The raw code is available.
/*
There are a total of 1 entries in the algebraic variable array.
There are a total of 17 entries in each of the rate and state variable arrays.
There are a total of 16 entries in the constant variable array.
*/
/*
* VOI is time in component environment (second).
* STATES[0] is Py in component Py (nanomolar).
* CONSTANTS[0] is Zn in component model_parameters (nanomolar).
* STATES[1] is Py1 in component Py1 (nanomolar).
* CONSTANTS[1] is r3 in component model_parameters (third_order_rate_constant).
* CONSTANTS[2] is r4 in component model_parameters (first_order_rate_constant).
* STATES[2] is Dw in component Dw (nanomolar).
* STATES[3] is Qw2 in component Qw2 (nanomolar).
* CONSTANTS[3] is k_1 in component model_parameters (first_order_rate_constant).
* CONSTANTS[4] is k1a in component model_parameters (second_order_rate_constant).
* STATES[4] is Qw1 in component Qw1 (nanomolar).
* STATES[5] is Rw in component Rw (nanomolar).
* CONSTANTS[5] is k2 in component model_parameters (second_order_rate_constant).
* CONSTANTS[6] is k_2 in component model_parameters (first_order_rate_constant).
* ALGEBRAIC[0] is k3 in component model_parameters (first_order_rate_constant).
* STATES[6] is Mw in component Mw (nanomolar).
* STATES[7] is Px in component Px (nanomolar).
* STATES[8] is Px1 in component Px1 (nanomolar).
* STATES[9] is Dz in component Dz (nanomolar).
* STATES[10] is Qz4 in component Qz4 (nanomolar).
* CONSTANTS[7] is r1 in component model_parameters (second_order_rate_constant).
* CONSTANTS[8] is r2 in component model_parameters (first_order_rate_constant).
* CONSTANTS[9] is k1b in component model_parameters (second_order_rate_constant).
* STATES[11] is Qz2 in component Qz2 (nanomolar).
* CONSTANTS[10] is k1 in component model_parameters (second_order_rate_constant).
* STATES[12] is Qz1 in component Qz1 (nanomolar).
* STATES[13] is Rz in component Rz (nanomolar).
* CONSTANTS[11] is k2a in component model_parameters (second_order_rate_constant).
* STATES[14] is Qz3 in component Qz3 (nanomolar).
* STATES[15] is Qz5 in component Qz5 (nanomolar).
* CONSTANTS[12] is k2b in component model_parameters (second_order_rate_constant).
* CONSTANTS[13] is k2c in component model_parameters (second_order_rate_constant).
* STATES[16] is Mz in component Mz (nanomolar).
* CONSTANTS[14] is td0 in component model_parameters (second).
* CONSTANTS[15] is td in component model_parameters (second).
* RATES[0] is d/dt Py in component Py (nanomolar).
* RATES[1] is d/dt Py1 in component Py1 (nanomolar).
* RATES[2] is d/dt Dw in component Dw (nanomolar).
* RATES[5] is d/dt Rw in component Rw (nanomolar).
* RATES[4] is d/dt Qw1 in component Qw1 (nanomolar).
* RATES[3] is d/dt Qw2 in component Qw2 (nanomolar).
* RATES[6] is d/dt Mw in component Mw (nanomolar).
* RATES[7] is d/dt Px in component Px (nanomolar).
* RATES[8] is d/dt Px1 in component Px1 (nanomolar).
* RATES[9] is d/dt Dz in component Dz (nanomolar).
* RATES[13] is d/dt Rz in component Rz (nanomolar).
* RATES[12] is d/dt Qz1 in component Qz1 (nanomolar).
* RATES[11] is d/dt Qz2 in component Qz2 (nanomolar).
* RATES[14] is d/dt Qz3 in component Qz3 (nanomolar).
* RATES[10] is d/dt Qz4 in component Qz4 (nanomolar).
* RATES[15] is d/dt Qz5 in component Qz5 (nanomolar).
* RATES[16] is d/dt Mz in component Mz (nanomolar).
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 25.0;
CONSTANTS[0] = 1E-5;
STATES[1] = 0.0;
CONSTANTS[1] = 4.41E10;
CONSTANTS[2] = 9E-3;
STATES[2] = 4.0;
STATES[3] = 0.0;
CONSTANTS[3] = 0.9;
CONSTANTS[4] = 1.0;
STATES[4] = 0.0;
STATES[5] = 50.0;
CONSTANTS[5] = 0.02;
CONSTANTS[6] = 0.3;
STATES[6] = 0.0;
STATES[7] = 25.0;
STATES[8] = 0.0;
STATES[9] = 4.0;
STATES[10] = 0.0;
CONSTANTS[7] = 2.73E2;
CONSTANTS[8] = 3.437E-4;
CONSTANTS[9] = 1.253E-2;
STATES[11] = 0.0;
CONSTANTS[10] = 0.025;
STATES[12] = 0.0;
STATES[13] = 50.0;
CONSTANTS[11] = 0.00005;
STATES[14] = 0.0;
STATES[15] = 0.0;
CONSTANTS[12] = 0.0002;
CONSTANTS[13] = 0.0037;
STATES[16] = 0.0;
CONSTANTS[14] = 1800.0;
CONSTANTS[15] = 2700;
}
void
computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
RATES[0] = CONSTANTS[2]*STATES[1] - CONSTANTS[1]*pow(CONSTANTS[0], 2.00000)*STATES[0];
RATES[1] = ( CONSTANTS[1]*pow(CONSTANTS[0], 2.00000)*STATES[0]+ CONSTANTS[3]*STATES[3]) - ( CONSTANTS[2]*STATES[1]+ CONSTANTS[4]*STATES[2]*STATES[1]);
RATES[3] = CONSTANTS[4]*STATES[2]*STATES[1] - CONSTANTS[3]*STATES[3];
RATES[7] = ( CONSTANTS[8]*STATES[8]+ CONSTANTS[3]*STATES[10]) - ( CONSTANTS[7]*CONSTANTS[0]*STATES[7]+ CONSTANTS[9]*STATES[9]*STATES[7]);
RATES[8] = ( CONSTANTS[7]*CONSTANTS[0]*STATES[7]+ CONSTANTS[3]*STATES[11]) - ( CONSTANTS[8]*STATES[8]+ CONSTANTS[10]*STATES[9]*STATES[8]);
ALGEBRAIC[0] = (VOI>=0.00000&&VOI<CONSTANTS[14] ? 0.00000 : VOI>=CONSTANTS[14]&&VOI<CONSTANTS[15] ? 0.0110000 : 0.0/0.0);
RATES[2] = ( CONSTANTS[3]*STATES[3]+ ALGEBRAIC[0]*STATES[4]+ CONSTANTS[6]*STATES[4]) - ( CONSTANTS[4]*STATES[2]*STATES[1]+ CONSTANTS[5]*STATES[2]*STATES[5]);
RATES[5] = ( ALGEBRAIC[0]*STATES[4]+ CONSTANTS[6]*STATES[4]) - CONSTANTS[5]*STATES[2]*STATES[5];
RATES[4] = CONSTANTS[5]*STATES[2]*STATES[5] - ( ALGEBRAIC[0]*STATES[4]+ CONSTANTS[6]*STATES[4]);
RATES[6] = ALGEBRAIC[0]*STATES[4];
RATES[9] = ( CONSTANTS[3]*STATES[11]+ ALGEBRAIC[0]*STATES[12]+ CONSTANTS[6]*STATES[12]+ CONSTANTS[3]*STATES[10]) - ( CONSTANTS[9]*STATES[9]*STATES[7]+ CONSTANTS[10]*STATES[9]*STATES[8]+ CONSTANTS[11]*STATES[9]*STATES[13]);
RATES[13] = ( ALGEBRAIC[0]*STATES[12]+ CONSTANTS[6]*STATES[12]+ ALGEBRAIC[0]*STATES[14]+ CONSTANTS[6]*STATES[14]+ ALGEBRAIC[0]*STATES[15]+ CONSTANTS[6]*STATES[15]) - ( CONSTANTS[11]*STATES[9]*STATES[13]+ CONSTANTS[12]*STATES[10]*STATES[13]+ CONSTANTS[13]*STATES[11]*STATES[13]);
RATES[12] = CONSTANTS[11]*STATES[9]*STATES[13] - ( ALGEBRAIC[0]*STATES[12]+ CONSTANTS[6]*STATES[12]);
RATES[11] = ( CONSTANTS[10]*STATES[9]*STATES[8]+ ALGEBRAIC[0]*STATES[14]+ CONSTANTS[6]*STATES[14]) - ( CONSTANTS[3]*STATES[11]+ CONSTANTS[13]*STATES[11]*STATES[13]);
RATES[14] = CONSTANTS[13]*STATES[11]*STATES[13] - ( ALGEBRAIC[0]*STATES[14]+ CONSTANTS[6]*STATES[14]);
RATES[10] = ( CONSTANTS[9]*STATES[9]*STATES[7]+ ALGEBRAIC[0]*STATES[15]+ CONSTANTS[6]*STATES[15]) - ( CONSTANTS[3]*STATES[10]+ CONSTANTS[12]*STATES[10]*STATES[13]);
RATES[15] = CONSTANTS[12]*STATES[10]*STATES[13] - ( ALGEBRAIC[0]*STATES[15]+ CONSTANTS[6]*STATES[15]);
RATES[16] = ALGEBRAIC[0]*STATES[12]+ ALGEBRAIC[0]*STATES[14]+ ALGEBRAIC[0]*STATES[15];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = (VOI>=0.00000&&VOI<CONSTANTS[14] ? 0.00000 : VOI>=CONSTANTS[14]&&VOI<CONSTANTS[15] ? 0.0110000 : 0.0/0.0);
}
