Generated Code

/*
   There are a total of 0 entries in the algebraic variable array.
   There are a total of 3 entries in each of the rate and state variable arrays.
   There are a total of 8 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (day).
 * STATES[0] is T in component target_cells (dimensionless).
 * CONSTANTS[0] is s in component target_cells (first_order_rate_constant).
 * CONSTANTS[1] is d in component target_cells (first_order_rate_constant).
 * CONSTANTS[2] is eta in component model_parameters (dimensionless).
 * STATES[1] is V in component viral_load (dimensionless).
 * CONSTANTS[3] is beta in component model_parameters (first_order_rate_constant).
 * STATES[2] is I in component infected_cells (dimensionless).
 * CONSTANTS[4] is delta in component infected_cells (first_order_rate_constant).
 * CONSTANTS[5] is epsilon in component viral_load (dimensionless).
 * CONSTANTS[6] is p in component viral_load (first_order_rate_constant).
 * CONSTANTS[7] is c in component viral_load (first_order_rate_constant).
 * RATES[0] is d/dt T in component target_cells (dimensionless).
 * RATES[2] is d/dt I in component infected_cells (dimensionless).
 * RATES[1] is d/dt V in component viral_load (dimensionless).
 * There are a total of 0 condition variables.
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 1000;
CONSTANTS[0] = 10.0;
CONSTANTS[1] = 0.02;
CONSTANTS[2] = 0.8;
STATES[1] = 9.4e6;
CONSTANTS[3] = 3e-7;
STATES[2] = 0;
CONSTANTS[4] = 0.5;
CONSTANTS[5] = 0.99;
CONSTANTS[6] = 100.0;
CONSTANTS[7] = 5.0;
RATES[0] = 0.1001;
RATES[2] = 0.1001;
RATES[1] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
                 double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - CONSTANTS[0] - ( CONSTANTS[1]*STATES[0]+ (1.00000 - CONSTANTS[2])*CONSTANTS[3]*STATES[1]*STATES[0]);
resid[1] = RATES[2] -  (1.00000 - CONSTANTS[2])*CONSTANTS[3]*STATES[1]*STATES[0] -  CONSTANTS[4]*STATES[2];
resid[2] = RATES[1] -  (1.00000 - CONSTANTS[5])*CONSTANTS[6]*STATES[2] -  CONSTANTS[7]*STATES[1];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
             double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}