Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 9 entries in the algebraic variable array.
There are a total of 3 entries in each of the rate and state variable arrays.
There are a total of 28 entries in the constant variable array.
*/
/*
* VOI is time in component environment (millisecond).
* STATES[0] is V in component membrane (millivolt).
* CONSTANTS[0] is Cm in component membrane (femtoF).
* ALGEBRAIC[7] is i_Ca in component calcium_current (picoA).
* ALGEBRAIC[0] is i_K in component rapidly_activating_K_current (picoA).
* ALGEBRAIC[5] is i_K_Ca in component calcium_activated_K_current (picoA).
* ALGEBRAIC[8] is i_Na_Ca in component Na_Ca_exchanger_current (picoA).
* CONSTANTS[1] is V_K in component rapidly_activating_K_current (millivolt).
* CONSTANTS[2] is g_K in component rapidly_activating_K_current (picoS).
* STATES[1] is n in component rapidly_activating_K_current_n_gate (dimensionless).
* ALGEBRAIC[1] is n_infinity in component rapidly_activating_K_current_n_gate (dimensionless).
* CONSTANTS[3] is lamda in component rapidly_activating_K_current_n_gate (dimensionless).
* ALGEBRAIC[2] is tau_n in component rapidly_activating_K_current_n_gate (millisecond).
* CONSTANTS[4] is V_n in component rapidly_activating_K_current_n_gate (millivolt).
* CONSTANTS[5] is S_n in component rapidly_activating_K_current_n_gate (millivolt).
* CONSTANTS[6] is a in component rapidly_activating_K_current_n_gate (millivolt).
* CONSTANTS[7] is b in component rapidly_activating_K_current_n_gate (millivolt).
* CONSTANTS[8] is c in component rapidly_activating_K_current_n_gate (millisecond).
* CONSTANTS[9] is V_ in component rapidly_activating_K_current_n_gate (millivolt).
* CONSTANTS[10] is V_Ca in component calcium_current (millivolt).
* CONSTANTS[11] is g_Ca in component calcium_current (picoS).
* ALGEBRAIC[3] is m_infinity in component calcium_current_m_gate (dimensionless).
* ALGEBRAIC[4] is h in component calcium_current_h_gate (dimensionless).
* CONSTANTS[12] is V_m in component calcium_current_m_gate (millivolt).
* CONSTANTS[13] is S_m in component calcium_current_m_gate (millivolt).
* CONSTANTS[14] is V_h in component calcium_current_h_gate (millivolt).
* CONSTANTS[15] is S_h in component calcium_current_h_gate (millivolt).
* CONSTANTS[16] is g_K_Ca in component calcium_activated_K_current (picoS).
* CONSTANTS[17] is K_d in component calcium_activated_K_current (micromolar).
* STATES[2] is Ca_i in component ionic_concentrations (micromolar).
* CONSTANTS[18] is g_Na_Ca in component Na_Ca_exchanger_current (picoS).
* CONSTANTS[19] is K_1_2 in component Na_Ca_exchanger_current (micromolar).
* ALGEBRAIC[6] is V_Na_Ca in component Na_Ca_exchanger_current (millivolt).
* CONSTANTS[20] is RT_F in component Na_Ca_exchanger_current (millivolt).
* CONSTANTS[21] is nH in component Na_Ca_exchanger_current (dimensionless).
* CONSTANTS[22] is Ca_o in component ionic_concentrations (micromolar).
* CONSTANTS[23] is Na_i in component ionic_concentrations (millimolar).
* CONSTANTS[24] is Na_o in component ionic_concentrations (millimolar).
* CONSTANTS[25] is f in component ionic_concentrations (dimensionless).
* CONSTANTS[26] is k_Ca in component ionic_concentrations (per_millisecond).
* CONSTANTS[27] is alpha in component ionic_concentrations (mole_per_microlitre_coulomb).
* RATES[0] is d/dt V in component membrane (millivolt).
* RATES[1] is d/dt n in component rapidly_activating_K_current_n_gate (dimensionless).
* RATES[2] is d/dt Ca_i in component ionic_concentrations (micromolar).
* There are a total of 0 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = -76.0;
CONSTANTS[0] = 5310.0;
CONSTANTS[1] = -75.0;
CONSTANTS[2] = 2500.0;
STATES[1] = 0.1;
CONSTANTS[3] = 1.6;
CONSTANTS[4] = -15.0;
CONSTANTS[5] = 5.6;
CONSTANTS[6] = 65.0;
CONSTANTS[7] = 20.0;
CONSTANTS[8] = 6.0;
CONSTANTS[9] = -75.0;
CONSTANTS[10] = 110.0;
CONSTANTS[11] = 1400.0;
CONSTANTS[12] = 4.0;
CONSTANTS[13] = 14.0;
CONSTANTS[14] = -10.0;
CONSTANTS[15] = -10.0;
CONSTANTS[16] = 30000.0;
CONSTANTS[17] = 100.0;
STATES[2] = 0.52;
CONSTANTS[18] = 234.0;
CONSTANTS[19] = 1.5;
CONSTANTS[20] = 26.54;
CONSTANTS[21] = 5.0;
CONSTANTS[22] = 2600.0;
CONSTANTS[23] = 10.0;
CONSTANTS[24] = 140.0;
CONSTANTS[25] = 0.001;
CONSTANTS[26] = 0.03;
CONSTANTS[27] = 0.0000045055;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - - (ALGEBRAIC[0]+ALGEBRAIC[7]+ALGEBRAIC[5]+ALGEBRAIC[8])/CONSTANTS[0];
resid[1] = RATES[1] - CONSTANTS[3]*((ALGEBRAIC[1] - STATES[1])/ALGEBRAIC[2]);
resid[2] = RATES[2] - CONSTANTS[25]*( - CONSTANTS[27]*(ALGEBRAIC[7] - 2.00000*ALGEBRAIC[8]) - CONSTANTS[26]*STATES[2]);
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = CONSTANTS[2]*STATES[1]*(STATES[0] - CONSTANTS[1]);
ALGEBRAIC[1] = 1.00000/(1.00000+exp((CONSTANTS[4] - STATES[0])/CONSTANTS[5]));
ALGEBRAIC[2] = CONSTANTS[8]/(exp((STATES[0] - CONSTANTS[9])/CONSTANTS[6])+exp((CONSTANTS[9] - STATES[0])/CONSTANTS[7]));
ALGEBRAIC[5] = CONSTANTS[16]*(STATES[2]/(CONSTANTS[17]+STATES[2]))*(STATES[0] - CONSTANTS[1]);
ALGEBRAIC[3] = 1.00000/(1.00000+exp((CONSTANTS[12] - STATES[0])/CONSTANTS[13]));
ALGEBRAIC[4] = 1.00000/(1.00000+exp((CONSTANTS[14] - STATES[0])/CONSTANTS[15]));
ALGEBRAIC[7] = CONSTANTS[11]*ALGEBRAIC[3]*ALGEBRAIC[4]*(STATES[0] - CONSTANTS[10]);
ALGEBRAIC[6] = CONSTANTS[20]*( 3.00000*log(CONSTANTS[24]/CONSTANTS[23] - log(CONSTANTS[22]/STATES[2])));
ALGEBRAIC[8] = CONSTANTS[18]*(pow(STATES[2], CONSTANTS[21])/(pow(CONSTANTS[19], CONSTANTS[21])+pow(STATES[2], CONSTANTS[21])))*(STATES[0] - ALGEBRAIC[6]);
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}
