Generated Code

The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)

The raw code is available.

/*
   There are a total of 15 entries in the algebraic variable array.
   There are a total of 6 entries in each of the rate and state variable arrays.
   There are a total of 33 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (second).
 * STATES[0] is V in component membrane (millivolt).
 * CONSTANTS[0] is R in component membrane (millijoule_per_mole_kelvin).
 * CONSTANTS[1] is T in component membrane (kelvin).
 * CONSTANTS[2] is F in component membrane (coulomb_per_mole).
 * CONSTANTS[3] is Cm in component membrane (microF_per_cm2).
 * ALGEBRAIC[7] is i_K_dr in component delayed_rectifier_K_channel_current (nanoA_per_cm2).
 * ALGEBRAIC[10] is i_K_Ca in component Ca_sensitive_K_current (nanoA_per_cm2).
 * ALGEBRAIC[11] is i_K_ATP in component ATP_sensitive_K_current (nanoA_per_cm2).
 * ALGEBRAIC[13] is i_fast in component fast_current (nanoA_per_cm2).
 * ALGEBRAIC[14] is i_Ca in component calcium_current (nanoA_per_cm2).
 * ALGEBRAIC[6] is i_NS in component cationic_nonselective_inward_current (nanoA_per_cm2).
 * ALGEBRAIC[12] is i_NaL in component Na_leak_current (nanoA_per_cm2).
 * CONSTANTS[4] is g_fast in component fast_current (microS_per_cm2).
 * CONSTANTS[5] is V_fast in component fast_current (millivolt).
 * ALGEBRAIC[0] is m_infinity in component fast_current_m_gate (dimensionless).
 * STATES[1] is h in component fast_current_h_gate (dimensionless).
 * CONSTANTS[6] is Vm in component fast_current_m_gate (millivolt).
 * CONSTANTS[7] is Sm in component fast_current_m_gate (millivolt).
 * CONSTANTS[8] is lamda_h in component fast_current_h_gate (per_second).
 * ALGEBRAIC[2] is tau_h in component fast_current_h_gate (second).
 * ALGEBRAIC[1] is h_infinity in component fast_current_h_gate (dimensionless).
 * CONSTANTS[9] is Vh in component fast_current_h_gate (millivolt).
 * CONSTANTS[10] is Sh in component fast_current_h_gate (millivolt).
 * CONSTANTS[11] is K_Ca in component calcium_current (micromolar).
 * CONSTANTS[12] is P_Ca in component calcium_current (nanoA_per_micromolar_per_cm2).
 * CONSTANTS[13] is Ca_o in component calcium_current (micromolar).
 * STATES[2] is Ca_i in component cytosolic_calcium (micromolar).
 * ALGEBRAIC[5] is f_infinity in component calcium_current_f_gate (dimensionless).
 * STATES[3] is d in component calcium_current_d_gate (dimensionless).
 * CONSTANTS[14] is lamda_d in component calcium_current_d_gate (per_second).
 * ALGEBRAIC[4] is tau_d in component calcium_current_d_gate (second).
 * ALGEBRAIC[3] is d_infinity in component calcium_current_d_gate (dimensionless).
 * CONSTANTS[15] is Vd in component calcium_current_d_gate (millivolt).
 * CONSTANTS[16] is Sd in component calcium_current_d_gate (millivolt).
 * CONSTANTS[17] is g_NS in component cationic_nonselective_inward_current (microS_per_cm2).
 * CONSTANTS[18] is K_NS in component cationic_nonselective_inward_current (micromolar).
 * CONSTANTS[19] is VNS in component cationic_nonselective_inward_current (millivolt).
 * STATES[4] is Ca_lum in component cytosolic_calcium (micromolar).
 * CONSTANTS[20] is V_K in component delayed_rectifier_K_channel_current (millivolt).
 * CONSTANTS[21] is g_K_dr in component delayed_rectifier_K_channel_current (microS_per_cm2).
 * STATES[5] is n in component delayed_rectifier_K_channel_current_n_gate (dimensionless).
 * CONSTANTS[22] is lamda_n in component delayed_rectifier_K_channel_current_n_gate (per_second).
 * CONSTANTS[23] is Vn in component delayed_rectifier_K_channel_current_n_gate (millivolt).
 * CONSTANTS[24] is Sn in component delayed_rectifier_K_channel_current_n_gate (millivolt).
 * ALGEBRAIC[8] is n_infinity in component delayed_rectifier_K_channel_current_n_gate (dimensionless).
 * ALGEBRAIC[9] is tau_n in component delayed_rectifier_K_channel_current_n_gate (second).
 * CONSTANTS[25] is g_K_Ca in component Ca_sensitive_K_current (microS_per_cm2).
 * CONSTANTS[26] is g_K_ATP in component ATP_sensitive_K_current (microS_per_cm2).
 * CONSTANTS[27] is g_NaL in component Na_leak_current (microS_per_cm2).
 * CONSTANTS[28] is V_Na in component Na_leak_current (millivolt).
 * CONSTANTS[29] is k_rel in component cytosolic_calcium (per_second).
 * CONSTANTS[30] is k_Ca in component cytosolic_calcium (per_second).
 * CONSTANTS[31] is k_pump in component cytosolic_calcium (per_second).
 * CONSTANTS[32] is omega in component cytosolic_calcium (micromolar_cm2_per_nanoA_per_second).
 * RATES[0] is d/dt V in component membrane (millivolt).
 * RATES[1] is d/dt h in component fast_current_h_gate (dimensionless).
 * RATES[3] is d/dt d in component calcium_current_d_gate (dimensionless).
 * RATES[5] is d/dt n in component delayed_rectifier_K_channel_current_n_gate (dimensionless).
 * RATES[2] is d/dt Ca_i in component cytosolic_calcium (micromolar).
 * RATES[4] is d/dt Ca_lum in component cytosolic_calcium (micromolar).
 * There are a total of 0 condition variables.
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = -38.34146;
CONSTANTS[0] = 8314;
CONSTANTS[1] = 310;
CONSTANTS[2] = 96485;
CONSTANTS[3] = 1;
CONSTANTS[4] = 600;
CONSTANTS[5] = 80;
STATES[1] = 0.214723;
CONSTANTS[6] = -25;
CONSTANTS[7] = 9;
CONSTANTS[8] = 12.5;
CONSTANTS[9] = -48;
CONSTANTS[10] = -7;
CONSTANTS[11] = 1;
CONSTANTS[12] = 2;
CONSTANTS[13] = 2500;
STATES[2] = 0.6959466;
STATES[3] = 0.0031711238;
CONSTANTS[14] = 2.5;
CONSTANTS[15] = -10;
CONSTANTS[16] = 5;
CONSTANTS[17] = 5;
CONSTANTS[18] = 50;
CONSTANTS[19] = -20;
STATES[4] = 102.686;
CONSTANTS[20] = -75;
CONSTANTS[21] = 600;
STATES[5] = 0.1836403;
CONSTANTS[22] = 12.5;
CONSTANTS[23] = -18;
CONSTANTS[24] = 14;
CONSTANTS[25] = 5;
CONSTANTS[26] = 2;
CONSTANTS[27] = 0.3;
CONSTANTS[28] = 80;
CONSTANTS[29] = 0.2;
CONSTANTS[30] = 7;
CONSTANTS[31] = 30;
CONSTANTS[32] = 0.2;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[3] = 0.1001;
RATES[5] = 0.1001;
RATES[2] = 0.1001;
RATES[4] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
                 double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - - (ALGEBRAIC[7]+ALGEBRAIC[10]+ALGEBRAIC[11]+ALGEBRAIC[13]+ALGEBRAIC[14]+ALGEBRAIC[6]+ALGEBRAIC[12])/CONSTANTS[3];
resid[1] = RATES[1] - (ALGEBRAIC[1] - STATES[1])/ALGEBRAIC[2];
resid[2] = RATES[3] - (ALGEBRAIC[3] - STATES[3])/ALGEBRAIC[4];
resid[3] = RATES[5] - (ALGEBRAIC[8] - STATES[5])/ALGEBRAIC[9];
resid[4] = RATES[2] -  CONSTANTS[29]*(STATES[4] - STATES[2]) - ( CONSTANTS[32]*ALGEBRAIC[14]+ CONSTANTS[30]*STATES[2]+ CONSTANTS[31]*STATES[2]);
resid[5] = RATES[4] -  - CONSTANTS[29]*(STATES[4] - STATES[2])+ CONSTANTS[31]*STATES[2];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[1] = 1.00000/(1.00000+exp((CONSTANTS[9] - STATES[0])/CONSTANTS[10]));
ALGEBRAIC[2] = 1.00000/( CONSTANTS[8]*(exp((CONSTANTS[9] - STATES[0])/( 2.00000*CONSTANTS[10]))+exp((STATES[0] - CONSTANTS[9])/( 2.00000*CONSTANTS[10]))));
ALGEBRAIC[3] = 1.00000/(1.00000+exp((CONSTANTS[15] - STATES[0])/CONSTANTS[16]));
ALGEBRAIC[4] = 1.00000/( CONSTANTS[14]*(exp((CONSTANTS[15] - STATES[0])/( 2.00000*CONSTANTS[16]))+exp((STATES[0] - CONSTANTS[15])/( 2.00000*CONSTANTS[16]))));
ALGEBRAIC[6] =  (( CONSTANTS[17]*pow(CONSTANTS[18], 2.00000))/(pow(CONSTANTS[18], 2.00000)+pow(STATES[4], 2.00000)))*((STATES[0] - CONSTANTS[19])/(1.00000 - exp( 0.100000*(CONSTANTS[19] - STATES[0]))) - 10.0000);
ALGEBRAIC[7] =  CONSTANTS[21]*pow(STATES[5], 4.00000)*(STATES[0] - CONSTANTS[20]);
ALGEBRAIC[8] = 1.00000/(1.00000+exp((CONSTANTS[23] - STATES[0])/CONSTANTS[24]));
ALGEBRAIC[9] = 1.00000/( CONSTANTS[22]*(exp((CONSTANTS[23] - STATES[0])/( 2.00000*CONSTANTS[24]))+exp((STATES[0] - CONSTANTS[23])/( 2.00000*CONSTANTS[24]))));
ALGEBRAIC[10] =  (( CONSTANTS[25]*pow(STATES[2], 3.00000))/(pow(CONSTANTS[11], 3.00000)+pow(STATES[2], 3.00000)))*(STATES[0] - CONSTANTS[20]);
ALGEBRAIC[11] =  CONSTANTS[26]*(STATES[0] - CONSTANTS[20]);
ALGEBRAIC[12] =  CONSTANTS[27]*(STATES[0] - CONSTANTS[28]);
ALGEBRAIC[0] = 1.00000/(1.00000+exp((CONSTANTS[6] - STATES[0])/CONSTANTS[7]));
ALGEBRAIC[13] =  CONSTANTS[4]*pow(ALGEBRAIC[0], 3.00000)*STATES[1]*(STATES[0] - CONSTANTS[5]);
ALGEBRAIC[5] = CONSTANTS[11]/(CONSTANTS[11]+STATES[2]);
ALGEBRAIC[14] = ( (( CONSTANTS[12]*STATES[3]*ALGEBRAIC[5]*2.00000*CONSTANTS[2]*STATES[0])/( CONSTANTS[0]*CONSTANTS[1]))*(CONSTANTS[13] -  STATES[2]*exp(( 2.00000*CONSTANTS[2]*STATES[0])/( CONSTANTS[0]*CONSTANTS[1]))))/(1.00000 - exp(( 2.00000*CONSTANTS[2]*STATES[0])/( CONSTANTS[0]*CONSTANTS[1])));
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
             double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}