Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 2 entries in the algebraic variable array.
There are a total of 5 entries in each of the rate and state variable arrays.
There are a total of 14 entries in the constant variable array.
*/
/*
* VOI is time in component environment (day).
* STATES[0] is X in component X (dimensionless).
* CONSTANTS[0] is mu0 in component X (first_order_rate_constant).
* CONSTANTS[1] is lamda in component X (first_order_rate_constant).
* STATES[1] is K in component K (first_order_rate_constant).
* STATES[2] is V in component V (dimensionless).
* STATES[3] is Y in component Y (dimensionless).
* CONSTANTS[2] is mu1 in component Y (first_order_rate_constant).
* CONSTANTS[3] is a in component Y (dimensionless).
* STATES[4] is Z in component Z (dimensionless).
* CONSTANTS[4] is mu2 in component V (first_order_rate_constant).
* CONSTANTS[5] is beta in component V (first_order_rate_constant).
* CONSTANTS[6] is b in component V (dimensionless).
* CONSTANTS[7] is theta in component Z (first_order_rate_constant).
* CONSTANTS[8] is rho in component Z (first_order_rate_constant).
* ALGEBRAIC[0] is f_X in component Z (dimensionless).
* ALGEBRAIC[1] is g_V in component Z (dimensionless).
* CONSTANTS[9] is C1 in component Z (dimensionless).
* CONSTANTS[10] is C2 in component Z (dimensionless).
* CONSTANTS[11] is X0 in component Z (dimensionless).
* CONSTANTS[12] is omega in component K (first_order_rate_constant).
* CONSTANTS[13] is Kmax in component K (first_order_rate_constant).
* RATES[0] is d/dt X in component X (dimensionless).
* RATES[3] is d/dt Y in component Y (dimensionless).
* RATES[2] is d/dt V in component V (dimensionless).
* RATES[4] is d/dt Z in component Z (dimensionless).
* RATES[1] is d/dt K in component K (first_order_rate_constant).
* There are a total of 0 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 1.0E11;
CONSTANTS[0] = 4.0E-3;
CONSTANTS[1] = 4.0E8;
STATES[1] = 1.35E-14;
STATES[2] = 1.0;
STATES[3] = 1.0;
CONSTANTS[2] = 0.30;
CONSTANTS[3] = 1.0;
STATES[4] = 0.0;
CONSTANTS[4] = 1.0;
CONSTANTS[5] = 1.0E3;
CONSTANTS[6] = 1.0;
CONSTANTS[7] = 1.0E-6;
CONSTANTS[8] = 0.50;
CONSTANTS[9] = 0.04;
CONSTANTS[10] = 1.0E3;
CONSTANTS[11] = 1.0E11;
CONSTANTS[12] = 1.0E-16;
CONSTANTS[13] = 20.0;
RATES[0] = 0.1001;
RATES[3] = 0.1001;
RATES[2] = 0.1001;
RATES[4] = 0.1001;
RATES[1] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - CONSTANTS[1] - ( CONSTANTS[0]*STATES[0]+ STATES[1]*STATES[2]*STATES[0]);
resid[1] = RATES[3] - STATES[1]*STATES[2]*STATES[3] - CONSTANTS[2]*(1.00000+ CONSTANTS[3]*STATES[4])*STATES[3];
resid[2] = RATES[2] - CONSTANTS[5]*STATES[3] - CONSTANTS[4]*(1.00000+ CONSTANTS[6]*STATES[4])*STATES[2];
resid[3] = RATES[4] - CONSTANTS[7]*ALGEBRAIC[1]+ CONSTANTS[8]*(ALGEBRAIC[0] - STATES[4])*STATES[4];
resid[4] = RATES[1] - CONSTANTS[12]*STATES[2]*(CONSTANTS[13] - STATES[1]);
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = ( (1.00000+CONSTANTS[9])*pow(STATES[0]/CONSTANTS[11], 2.00000))/(CONSTANTS[9]+pow(STATES[0]/CONSTANTS[11], 2.00000));
ALGEBRAIC[1] = STATES[2]/(CONSTANTS[10]+STATES[2]);
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}
