Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/*
There are a total of 1 entries in the algebraic variable array.
There are a total of 6 entries in each of the rate and state variable arrays.
There are a total of 8 entries in the constant variable array.
*/
/*
* VOI is time in component environment (minute).
* ALGEBRAIC[0] is l in component l (dimensionless).
* STATES[0] is l_RI_RII in component l_RI_RII (dimensionless).
* STATES[1] is RI in component RI (dimensionless).
* STATES[2] is RII in component RII (dimensionless).
* CONSTANTS[0] is ka in component model_parameters (per_minute).
* CONSTANTS[1] is ki in component model_parameters (per_minute).
* CONSTANTS[2] is kcd in component model_parameters (per_minute).
* CONSTANTS[3] is klid in component model_parameters (per_minute).
* STATES[3] is RI_endo in component RI_endo (dimensionless).
* STATES[4] is l_RI_RII_endo in component l_RI_RII_endo (dimensionless).
* CONSTANTS[4] is kr in component model_parameters (per_minute).
* CONSTANTS[5] is p_RI in component model_parameters (per_minute).
* CONSTANTS[6] is alpha in component model_parameters (dimensionless).
* STATES[5] is RII_endo in component RII_endo (dimensionless).
* CONSTANTS[7] is p_RII in component model_parameters (per_minute).
* RATES[0] is d/dt l_RI_RII in component l_RI_RII (dimensionless).
* RATES[1] is d/dt RI in component RI (dimensionless).
* RATES[2] is d/dt RII in component RII (dimensionless).
* RATES[4] is d/dt l_RI_RII_endo in component l_RI_RII_endo (dimensionless).
* RATES[3] is d/dt RI_endo in component RI_endo (dimensionless).
* RATES[5] is d/dt RII_endo in component RII_endo (dimensionless).
* There are a total of 1 condition variables.
*/
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 0.0;
STATES[1] = 20.0;
STATES[2] = 20.0;
CONSTANTS[0] = 1;
CONSTANTS[1] = 0.333333333;
CONSTANTS[2] = 0.0277777778;
CONSTANTS[3] = 0.25;
STATES[3] = 0.0;
STATES[4] = 40.0;
CONSTANTS[4] = 0.033333333;
CONSTANTS[5] = 8;
CONSTANTS[6] = 1;
STATES[5] = 0.0;
CONSTANTS[7] = 4;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[4] = 0.1001;
RATES[3] = 0.1001;
RATES[5] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - CONSTANTS[0]*ALGEBRAIC[0]*STATES[1]*STATES[2] - (CONSTANTS[2]+CONSTANTS[3]+CONSTANTS[1])*STATES[0];
resid[1] = RATES[1] - (CONSTANTS[5]+ CONSTANTS[4]*STATES[3]+ CONSTANTS[6]*CONSTANTS[4]*STATES[4]) - ( CONSTANTS[0]*ALGEBRAIC[0]*STATES[1]*STATES[2]+ (CONSTANTS[2]+CONSTANTS[1])*STATES[1]);
resid[2] = RATES[2] - (CONSTANTS[7]+ CONSTANTS[4]*STATES[5]+ CONSTANTS[6]*CONSTANTS[4]*STATES[4]) - ( CONSTANTS[0]*ALGEBRAIC[0]*STATES[1]*STATES[2]+ (CONSTANTS[2]+CONSTANTS[1])*STATES[2]);
resid[3] = RATES[4] - CONSTANTS[1]*STATES[0] - CONSTANTS[4]*STATES[4];
resid[4] = RATES[3] - CONSTANTS[1]*STATES[1] - CONSTANTS[4]*STATES[3];
resid[5] = RATES[5] - CONSTANTS[1]*STATES[2] - CONSTANTS[4]*STATES[5];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = (CONDVAR[0]>=0.00000 ? 0.0100000 : 3.00000e-05);
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
CONDVAR[0] = VOI - 2500.00;
}
