Location: Andre's Hodgkin Huxley model @ 6e2bed224b4a / experiments / runAll.pl

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2012-09-24 16:19:08+12:00
Desc:
moving all metadata to external files to clean up the CellML code for tutorial purposes. Using my new rdfExtrator tool to do the work.
Permanent Source URI:
https://staging.physiomeproject.org/w/andre/HH/rawfile/6e2bed224b4a37b5a92f3e5031f8917f4c69fc8f/experiments/runAll.pl
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#!/usr/bin/perl

use strict;

my $exe = "$ENV{HOME}/sf.net/CellMLSimulator/build/release/CellMLSimulator";
my $output = "generated";

mkdir $output;

my @experiments = ("IK-gating-kinetics","INa-gating-kinetics",
                   "periodic-stimulus","voltage-clamp");

foreach my $exp (@experiments) {
  my $o = $output . "/" . $exp;
  my $g = $exp . "-graphs.xml";
  mkdir $o;
  system("$exe --graph-directory=$o --reference-description --data=$o/data.h5 $g");
}