Location: VPH-MIP case study on CellML @ 864d147e9782 / index.html
- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2012-10-04 17:21:00+13:00
- Desc:
- updating SED-ML to point to the new workspace URL for this stipped down version of the HH model and experiment; added a plot for the gating variables which are now also exposed.
- Permanent Source URI:
- https://staging.physiomeproject.org/w/andre/VPH-MIP/rawfile/864d147e9782221b03086ae6700acf3e95cb83d4/index.html
This workspace holds my encoding of the Hodgkin & Huxley (1952) model. It is also a useful example to use for explaining the basics of CellML.
Direct links to some of the useful documents in this workspace:
- The complete Hodgkin & Huxley mathematical model:
components/stimulated.xml; the base model to be instantiated into specific simulation experiments. - The complete set of default parameter values and initial conditions from the HH paper:
components/default-variable-values.xml - The HH model configured and parameterised with an applied periodic stimulus current:
experiments/periodic-stimulus.xml - A SED-ML description of a simulation experiment for the periodic stimulus experiment:
sed-ml/periodic-stimulus.xml; can be used in the SED-ML Web Tools to produce the results shown in the tutorial.