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    <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003</link>
    <language>en-us</language>
    <title>On the encoding and decoding of calcium signals in hepatocytes</title>
    <description>Many different agonists use calcium as a second messenger. Despite intensive research in intracellular calcium signalling it is an unsolved riddle how the different types of information represented by the different agonists, is encoded using the universal carrier calcium. It is also still not clear how the information encoded is decoded again into the intracellular specific information at the site of enzymes and genes. After the discovery of calcium oscillations, one likely mechanism is that information is encoded in the frequency, amplitude and waveform of the oscillations. This hypothesis has received some experimental support. However, the mechanism of decoding of oscillatory signals is still not known. Here, we study a mechanistic model of calcium oscillations, which is able to reproduce both spiking and bursting calcium oscillations. We use the model to study the decoding of calcium signals on the basis of co-operativity of calcium binding to various proteins. We show that this co-operativity offers a simple way to decode different calcium dynamics into different enzyme activities.</description>
    <item>
      <title>Added images in ai svg and png format. Added xul file and clickable session files. Zoom is currently broken.</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/bdb5e309844ed8cdd65fe9cf3ed5456310b87d37</link>
      <description>Added images in ai svg and png format. Added xul file and clickable session files. Zoom is currently broken.
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-09-12</pubDate>
    </item>
    <item>
      <title>Added HTML file to workspace</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/683c12736e417a79e6f60951e34f61d14090ab95</link>
      <description>Added HTML file to workspace
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-08-03</pubDate>
    </item>
    <item>
      <title>Corrected the fifth term in larsen_olsen_kummer_2003a</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/0964b0d8e410794be0a60616e97b793add142e2c</link>
      <description>Corrected the fifth term in larsen_olsen_kummer_2003a
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-08-03</pubDate>
    </item>
    <item>
      <title>Added third CellML file to recreate Figure 4. This is the c file.</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/2b82cddf3ddf0a1dcd5149280edd3ca3700a8809</link>
      <description>Added third CellML file to recreate Figure 4. This is the c file.
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-08-01</pubDate>
    </item>
    <item>
      <title>Removed previus versions of cellML</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/5c04b8cfa2cc8733812d709278698e1c91d7e2c4</link>
      <description>Removed previus versions of cellML
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-07-29</pubDate>
    </item>
    <item>
      <title>Added cellML and session files for a - figure2 graphc and b- figure3 graphc. b does not recreate published results</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/401c29e8001d9bd561b67747e3efca53039f6f4e</link>
      <description>Added cellML and session files for a - figure2 graphc and b- figure3 graphc. b does not recreate published results
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-07-29</pubDate>
    </item>
    <item>
      <title>Fixed session file</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/131179e594027378987022a869f281d4188ab64b</link>
      <description>Fixed session file
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-07-28</pubDate>
    </item>
    <item>
      <title>Added CellML file and session file using parameters for figure 2, eqns 1-5</title>
      <link>https://staging.physiomeproject.org/w/hnielsen/larsen_olsen_kummer_2003/@@file/f2accee3e2af0b6b38841e26358a1b4cab80838f</link>
      <description>Added CellML file and session file using parameters for figure 2, eqns 1-5
</description>
      <author>&amp;#72;&amp;#97;&amp;#110;&amp;#110;&amp;#101;&amp;#32;&amp;#78;&amp;#105;&amp;#101;&amp;#108;&amp;#115;&amp;#101;&amp;#110;</author>
      <pubDate>2011-07-27</pubDate>
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