Location: Metabolic Component Library @ 702b54b45018 / CellML-source / CellMLTools / template / components.vm
- Author:
- Randall Britten <r.britten@auckland.ac.nz>
- Date:
- 2013-04-17 15:30:14+12:00
- Desc:
- To "clone" an imported component, the top level import element needs to be duplicated, not just the component reference within an existing import. The rationale is that all connections within a top-level import are kept intact, as dictated by the encapsulation in the imported model.
- Permanent Source URI:
- https://staging.physiomeproject.org/w/matthiaskoenig/MetabolicComponentLibrary/rawfile/702b54b45018b04ef1bc074677379dc20d983234/CellML-source/CellMLTools/template/components.vm
Metabolic Component Library for CellML
Matthias Koenig [1] & Randall Britten [2][1] Charite Berlin, matthias.koenig@charite.de
[2] Auckland Bioengineering Institute
Implementation of standardized reaction kinetics in CellML for reuse in metabolic models. The library covers the metabolic function definitions for processes from COPASI 4.8 (Bulid 35).
Components
Substrate(s) : S (S1, S2, ...)Product(s) : P (P1, P2, ... )
Inhibitor(s) : I (I1, I2, ...)
Activator(s) : A (A1, A2, ...)
Modifier(s) : M (M1, M2, ...)
#* Render the HTML overview dynamically based on the defined components. Changes in the underlying definitions of the components will be directly reflected in the documentation. *# #foreach( $c in $cSet )
$c.getName()
 (Validation Errors: ${c.getNValidationErrors()})#foreach ( $var in $c.getVariablesFromKineticsComponent() ) $var #end |
}.png) |
|
Mechanisms #foreach( $m in $c.getSBGNSet()) $m #end |
#foreach( $m in $c.getSBGNSet())
#end
|
#end