Location: Metabolic Component Library @ f963a33d3d8f / CellML-source / CellMLTools / src / componentlibrary / RComponentTest.java

Author:

Matthias K?nig <matthias.koenig@charite.de>

Date:

2013-04-21 20:13:13+02:00

Desc:

Nazaret 2009 example implemented and integratable. Results between normal and MCL implementation not identical ! Problems with original model implementation (no steady state)!

Permanent Source URI:

https://staging.physiomeproject.org/w/matthiaskoenig/MetabolicComponentLibrary/rawfile/f963a33d3d8fb4ce27a9e04729b5038282db7623/CellML-source/CellMLTools/src/componentlibrary/RComponentTest.java

package componentlibrary;

import java.util.List;
import java.util.TreeMap;


/* Get additional information for the component from the CellML and run the test. */
public class RComponentTest {
	
	public static void main(String[] args) throws Exception{
		TreeMap<String, RComponent> cMap = RComponentImporter.readComponentsFromCSV();
		int count = 1;
		for (RComponent c: cMap.values()){
			RCellMLComponent rcc = new RCellMLComponent(c);
			rcc.print(count);
			List<String> vars = rcc.getVariablesFromKineticsComponent();
			for (String var: vars){
				System.out.println(var);
			}
			System.out.println("\nValidation Errors: " + rcc.getNValidationErrors());
			
			//if (count == 1){break;}
			count++;
		}
	}
}