- Author:
- Ting Yu <ting.yu@auckland.ac.nz>
- Date:
- 2014-03-26 11:04:26+13:00
- Desc:
- Complete the connections.
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/194/rawfile/9b8f55e1e6b7d6f5bead83f4274c6e8edd4863ac/cellml/Ikeda.cellml
<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="Ikeda">
<component name="GeneralParameters">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="1">
<eq/>
<ci>FCOI
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0
</cn>
</apply>
<apply id="2">
<eq/>
<ci>QVIN
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0
</cn>
</apply>
<apply id="3">
<eq/>
<ci>QIN
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.001
</cn>
</apply>
<apply id="4">
<eq/>
<ci>FO2I
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.21
</cn>
</apply>
<apply id="5">
<eq/>
<ci>QIWL
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.0005
</cn>
</apply>
<apply id="6">
<eq/>
<ci>QMWP
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.0005
</cn>
</apply>
<apply id="7">
<eq/>
<ci>YNIN
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.12
</cn>
</apply>
<apply id="8">
<eq/>
<ci>YCLI
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0.1328
</cn>
</apply>
<apply id="9">
<eq/>
<ci>YGLI
</ci>
<cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">0
</cn>
</apply>
</math>
<variable name="FCOI" public_interface="out" units="dimensionless"/>
<variable name="QVIN" public_interface="out" units="dimensionless"/>
<variable name="QIN" public_interface="out" units="dimensionless"/>
<variable name="FO2I" public_interface="out" units="dimensionless"/>
<variable name="QIWL" public_interface="out" units="dimensionless"/>
<variable name="QMWP" public_interface="out" units="dimensionless"/>
<variable name="YNIN" public_interface="out" units="dimensionless"/>
<variable name="YCLI" public_interface="out" units="dimensionless"/>
<variable name="YGLI" public_interface="out" units="dimensionless"/>
<variable initial_value="0" name="t" public_interface="out" units="dimensionless"/>
</component>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="Respiration.cellml">
<component component_ref="Respiration" name="Respiration"/>
<component component_ref="Inputs" name="Inputs"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="ExtracellularSpace.cellml">
<component component_ref="ExtracellularSpace" name="ExtracellularSpace"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="CardiovascularSystem.cellml">
<component component_ref="CardiovascularSystem" name="CardiovascularSystem"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="IntracellularSpaceElectrolytes.cellml">
<component component_ref="IntracellularSpaceElectrolytes" name="IntracellularSpaceElectrolytes"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="Kidney1.cellml">
<component component_ref="Kidney1" name="Kidney1"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="Kidney2.cellml">
<component component_ref="Kidney2" name="Kidney2"/>
</import>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="RenalFunctionController.cellml">
<component component_ref="RenalFunctionController" name="RenalFunctionController"/>
</import>
<connection>
<map_components component_1="CardiovascularSystem" component_2="ExtracellularSpace"/>
<map_variables variable_1="VB" variable_2="VB"/>
<map_variables variable_1="PAS" variable_2="PAS"/>
<map_variables variable_1="PVS" variable_2="PVS"/>
</connection>
<connection>
<map_components component_1="CardiovascularSystem" component_2="Respiration"/>
<map_variables variable_1="QCO" variable_2="QCO"/>
</connection>
<connection>
<map_components component_1="CardiovascularSystem" component_2="RenalFunctionController"/>
<map_variables variable_1="PVP" variable_2="PVP"/>
<map_variables variable_1="PAS" variable_2="PAS"/>
</connection>
<connection>
<map_components component_1="Respiration" component_2="Kidney2"/>
<map_variables variable_1="STBC" variable_2="STBC"/>
<map_variables variable_1="DCLA" variable_2="DCLA"/>
<map_variables variable_1="PCOA" variable_2="PCOA"/>
<map_variables variable_1="XCO3" variable_2="XCO3"/>
</connection>
<connection>
<map_components component_1="Respiration" component_2="IntracellularSpaceElectrolytes"/>
<map_variables variable_1="VTW" variable_2="VTW"/>
<map_variables variable_1="PHA" variable_2="PHA"/>
</connection>
<connection>
<map_components component_1="ExtracellularSpace" component_2="IntracellularSpaceElectrolytes"/>
<map_variables variable_1="QIC" variable_2="QIC"/>
<map_variables variable_1="VEC" variable_2="VEC"/>
</connection>
<connection>
<map_components component_1="ExtracellularSpace" component_2="Kidney1"/>
<map_variables variable_1="QWU" variable_2="QWU"/>
</connection>
<connection>
<map_components component_1="IntracellularSpaceElectrolytes" component_2="RenalFunctionController"/>
<map_variables variable_1="GFR" variable_2="GFR"/>
<map_variables variable_1="OSMP" variable_2="OSMP"/>
<map_variables variable_1="XKE" variable_2="XKE"/>
</connection>
<connection>
<map_components component_1="IntracellularSpaceElectrolytes" component_2="Kidney1"/>
<map_variables variable_1="YKU" variable_2="YKU"/>
<map_variables variable_1="YNU" variable_2="YNU"/>
<map_variables variable_1="OSMP" variable_2="OSMP"/>
<map_variables variable_1="XKE" variable_2="XKE"/>
<map_variables variable_1="XNE" variable_2="XNE"/>
<map_variables variable_1="YGLU" variable_2="YGLU"/>
<map_variables variable_1="YMNU" variable_2="YMNU"/>
<map_variables variable_1="YURU" variable_2="YURU"/>
</connection>
<connection>
<map_components component_1="Kidney2" component_2="RenalFunctionController"/>
<map_variables variable_1="GFR" variable_2="GFR"/>
</connection>
<connection>
<map_components component_1="ExtracellularSpace" component_2="Kidney2"/>
<map_variables variable_1="VEC" variable_2="VEC"/>
<map_variables variable_1="XPP" variable_2="XPP"/>
</connection>
<connection>
<map_components component_1="IntracellularSpaceElectrolytes" component_2="Kidney2"/>
<map_variables variable_1="XKE" variable_2="XKE"/>
<map_variables variable_1="XNE" variable_2="XNE"/>
</connection>
<connection>
<map_components component_1="Kidney2" component_2="Kidney1"/>
<map_variables variable_1="YKU" variable_2="YKU"/>
<map_variables variable_1="YNU" variable_2="YNU"/>
<map_variables variable_1="YNH4" variable_2="YNH4"/>
<map_variables variable_1="STPG" variable_2="STPG"/>
<map_variables variable_1="YCO3" variable_2="YCO3"/>
<map_variables variable_1="YORG" variable_2="YORG"/>
<map_variables variable_1="YPO4" variable_2="YPO4"/>
</connection>
<connection>
<map_components component_1="Kidney1" component_2="RenalFunctionController"/>
<map_variables variable_1="ADH" variable_2="ADH"/>
<map_variables variable_1="ALD" variable_2="ALD"/>
<map_variables variable_1="GFR" variable_2="GFR"/>
<map_variables variable_1="THDF" variable_2="THDF"/>
<map_variables variable_1="YNH" variable_2="YNH"/>
</connection>
<connection>
<map_components component_1="Respiration" component_2="Kidney1"/>
<map_variables variable_1="PHA" variable_2="PHA"/>
</connection>
<connection>
<map_components component_1="ExtracellularSpace" component_2="RenalFunctionController"/>
<map_variables variable_1="PPCO" variable_2="PPCO"/>
<map_variables variable_1="VEC" variable_2="VEC"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="ExtracellularSpace"/>
<map_variables variable_1="QIWL" variable_2="QIWL"/>
<map_variables variable_1="QVIN" variable_2="QVIN"/>
<map_variables variable_1="QMWP" variable_2="QMWP"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="IntracellularSpaceElectrolytes"/>
<map_variables variable_1="YGLI" variable_2="YGLI"/>
<map_variables variable_1="YNIN" variable_2="YNIN"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<connection>
<map_components component_1="Inputs" component_2="Kidney1"/>
<map_variables variable_1="TRSP" variable_2="TRSP"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="Kidney2"/>
<map_variables variable_1="YCLI" variable_2="YCLI"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="Respiration"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="Kidney1"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<connection>
<map_components component_1="GeneralParameters" component_2="RenalFunctionController"/>
<map_variables variable_1="t" variable_2="t"/>
</connection>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"><rdf:Description rdf:nodeID="n1"><boundIntervals xmlns="http://www.cellml.org/metadata/simulation/1.0#"><rdf:Description rdf:nodeID="n2"/></boundIntervals></rdf:Description><rdf:Description rdf:about="#HwPNWgUmMPR"><simulation xmlns="http://www.cellml.org/metadata/simulation/1.0#"><rdf:Description rdf:nodeID="n1"/></simulation></rdf:Description><rdf:Description rdf:nodeID="n3"><rdf:rest><rdf:Description rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n4"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n5"><endingValue xmlns="http://www.cellml.org/metadata/simulation/1.0#" xml:lang="en">180</endingValue><algorithm xmlns="http://www.cellml.org/metadata/simulation/1.0#nonstandard-" xml:lang="en">IDA</algorithm></rdf:Description><rdf:Description rdf:nodeID="n2"><rdf:rest><rdf:Description rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/></rdf:rest><rdf:first><rdf:Description rdf:nodeID="n5"/></rdf:first></rdf:Description><rdf:Description rdf:nodeID="n6"><boundIntervals xmlns="http://www.cellml.org/metadata/simulation/1.0#"><rdf:Description rdf:nodeID="n3"/></boundIntervals></rdf:Description><rdf:Description rdf:nodeID="n4"><endingValue xmlns="http://www.cellml.org/metadata/simulation/1.0#" xml:lang="en">180
</endingValue><pointDensity xmlns="http://www.cellml.org/metadata/simulation/1.0#nonstandard-" xml:lang="en">500
</pointDensity></rdf:Description><rdf:Description rdf:about="#Er5uQhV3KD3"><simulation xmlns="http://www.cellml.org/metadata/simulation/1.0#"><rdf:Description rdf:nodeID="n6"/></simulation></rdf:Description></rdf:RDF></model>
