Location: semantic-annotation @ 66df808c6603 / SEDML / protocol10_chang_fujita_1999.rdf

Author:
Dewan Sarwar <dsar941@UoA.auckland.ac.nz>
Date:
2020-03-03 13:07:32+13:00
Desc:
adding protocol 12's SEDML files
Permanent Source URI:
https://staging.physiomeproject.org/workspace/267/rawfile/66df808c6603effc4e5a0a26175a1dd321d2c1b2/SEDML/protocol10_chang_fujita_1999.rdf

  <rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" 
           xmlns:ro="http://www.obofoundry.org/ro/ro.owl#" 
           xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 
           xmlns:semsim="http://www.bhi.washington.edu/SemSim#" 
           xmlns:dcterms="http://purl.org/dc/terms/">

			<rdf:Description rdf:about="protocol10_chang_fujita_1999.sedml#reaction_constants.Na">
			  <semsim:isComputationalComponentFor>
				<rdf:Description rdf:about="#property_3">
				  <semsim:physicalPropertyOf>
					<rdf:Description rdf:about="#entity_0">
					  <ro:part_of>
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						</rdf:Description>
					  </ro:part_of>
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					</rdf:Description>
				  </semsim:physicalPropertyOf>
				  <semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340" />
				</rdf:Description>
			  </semsim:isComputationalComponentFor>
			  <dcterms:description>Concentration of sodium in the portion of renal filtrate in proximal convoluted tubule compartment</dcterms:description>
			</rdf:Description>
			<rdf:Description rdf:about="protocol10_chang_fujita_1999.sedml#reaction_constants.Na_">
			  <semsim:isComputationalComponentFor>
				<rdf:Description rdf:about="#property_5">
				  <semsim:physicalPropertyOf>
					<rdf:Description rdf:about="#entity_3">
					  <ro:part_of>
						<rdf:Description rdf:about="#entity_4">
						  <ro:part_of>
							<rdf:Description rdf:about="#entity_5">
							  <semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/FMA_70973" />
							</rdf:Description>
						  </ro:part_of>
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						</rdf:Description>
					  </ro:part_of>
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					</rdf:Description>
				  </semsim:physicalPropertyOf>
				  <semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340" />
				</rdf:Description>
			  </semsim:isComputationalComponentFor>
			  <dcterms:description>Concentration of sodium in the portion of cytosol in epithelial cell of proximal tubule compartment</dcterms:description>
			</rdf:Description>
			<rdf:Description rdf:about="protocol10_chang_fujita_1999.sedml#reaction_constants.Cl">
			  <semsim:isComputationalComponentFor>
				<rdf:Description rdf:about="#property_1">
				  <semsim:physicalPropertyOf>
					<rdf:Description rdf:about="#entity_2">
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				</rdf:Description>
			  </semsim:isComputationalComponentFor>
			  <dcterms:description>Concentration of chloride in the portion of renal filtrate in proximal convoluted tubule compartment</dcterms:description>
			</rdf:Description>
			<rdf:Description rdf:about="protocol10_chang_fujita_1999.sedml#reaction_constants.J_Na">
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				  <semsim:physicalPropertyOf>
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					  <semsim:hasMediatorParticipant>
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								</rdf:Description>
							  </ro:part_of>
							  <semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/PR_P26433" />
							</rdf:Description>
						  </semsim:hasPhysicalEntityReference>
						</rdf:Description>
					  </semsim:hasMediatorParticipant>
					  <semsim:hasSinkParticipant>
						<rdf:Description rdf:about="#sink_0" semsim:hasMultiplier="1.0">
						  <semsim:hasPhysicalEntityReference rdf:resource="#entity_3" />
						</rdf:Description>
					  </semsim:hasSinkParticipant>
					  <semsim:hasSourceParticipant>
						<rdf:Description rdf:about="#source_0" semsim:hasMultiplier="1.0">
						  <semsim:hasPhysicalEntityReference rdf:resource="#entity_0" />
						</rdf:Description>
					  </semsim:hasSourceParticipant>
					  <semsim:name>Na+ flow through sodium/hydrogen exchanger 3</semsim:name>
					</rdf:Description>
				  </semsim:physicalPropertyOf>
				  <semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00593" />
				</rdf:Description>
			  </semsim:isComputationalComponentFor>
			  <dcterms:description>Flux of sodium from portion of renal filtrate in proximal convoluted tubule to portion of cytosol in epithelial cell of proximal tubule through sodium/hydrogen exchanger 3</dcterms:description>
			</rdf:Description>
			<rdf:Description rdf:about="protocol10_chang_fujita_1999.sedml#chang_fujita_1999_10">
			  <ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_66836" />
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			  <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_84666" />
			  <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_70981" />
			  <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_17721" />
			  <ro:modelOf rdf:resource="http://purl.obolibrary.org/obo/PR_P59158" />
			  <bqbiol:isTime rdf:resource="http://identifiers.org/opb/OPB_01023" />
			</rdf:Description>		
  </rdf:RDF>