Location: semantic-annotation @ 92367a08b2bb / SEDML / 13_benson_endocardial_2008.rdf

Author:
Dewan Sarwar <dsar941@UoA.auckland.ac.nz>
Date:
2020-06-25 21:17:52+12:00
Desc:
annotations changed for mackenzie model
Permanent Source URI:
https://staging.physiomeproject.org/workspace/267/rawfile/92367a08b2bb9612257ef3f32b6823adf5e0d53b/SEDML/13_benson_endocardial_2008.rdf
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<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"
         xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
         xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
         xmlns:semsim="http://www.bhi.washington.edu/SemSim#"
         xmlns:dcterms="http://purl.org/dc/terms/">

    <rdf:Description rdf:about="protocol13_benson_endocardial_2008.sedml#cell.V">
        <semsim:isComputationalComponentFor>
            <rdf:Description rdf:about="#property_0">
                <semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00506"/>
            </rdf:Description>
        </semsim:isComputationalComponentFor>
        <dcterms:description>Transmembrane potential</dcterms:description>
    </rdf:Description>
    <rdf:Description rdf:about="protocol13_benson_endocardial_2008.sedml#ICaL.ICaL">
        <semsim:isComputationalComponentFor>
            <rdf:Description rdf:about="#property_1">
                <semsim:physicalPropertyOf>
                    <rdf:Description rdf:about="#process_0">
                        <semsim:hasMediatorParticipant>
                            <rdf:Description rdf:about="#mediator_0">
                                <semsim:hasPhysicalEntityReference>
                                    <rdf:Description rdf:about="#entity_2">
                                        <semsim:hasPhysicalDefinition
                                                rdf:resource="http://purl.obolibrary.org/obo/FMA_84669"/>
                                    </rdf:Description>
                                </semsim:hasPhysicalEntityReference>
                            </rdf:Description>
                        </semsim:hasMediatorParticipant>
                        <semsim:hasSinkParticipant>
                            <rdf:Description rdf:about="#sink_0" semsim:hasMultiplier="1.0">
                                <semsim:hasPhysicalEntityReference>
                                    <rdf:Description rdf:about="#entity_1">
                                        <semsim:hasPhysicalDefinition
                                                rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
                                    </rdf:Description>
                                </semsim:hasPhysicalEntityReference>
                            </rdf:Description>
                        </semsim:hasSinkParticipant>
                        <semsim:hasSourceParticipant>
                            <rdf:Description rdf:about="#source_0" semsim:hasMultiplier="1.0">
                                <semsim:hasPhysicalEntityReference>
                                    <rdf:Description rdf:about="#entity_0">
                                        <semsim:hasPhysicalDefinition
                                                rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
                                    </rdf:Description>
                                </semsim:hasPhysicalEntityReference>
                            </rdf:Description>
                        </semsim:hasSourceParticipant>
                        <semsim:name>current flow across apical plasma membrane</semsim:name>
                    </rdf:Description>
                </semsim:physicalPropertyOf>
                <semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00318"/>
            </rdf:Description>
        </semsim:isComputationalComponentFor>
        <dcterms:description>current flowing from interstitial fluid to cytosol compartment across apical plasma
            membrane
        </dcterms:description>
    </rdf:Description>
    <rdf:Description rdf:about="protocol13_benson_endocardial_2008.sedml#benson_endocardial_2008_13">
        <ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
        <ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_74550"/>
        <ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_84666"/>
        <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_84666"/>
        <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_70981"/>
        <ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_17721"/>
        <ro:modelOf rdf:resource="http://purl.obolibrary.org/obo/PR_P59158"/>
        <bqbiol:isTime rdf:resource="http://identifiers.org/opb/OPB_01023"/>
    </rdf:Description>
</rdf:RDF>