- Author:
- Dewan Sarwar <dsar941@UoA.auckland.ac.nz>
- Date:
- 2020-06-25 21:17:52+12:00
- Desc:
- annotations changed for mackenzie model
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/267/rawfile/92367a08b2bb9612257ef3f32b6823adf5e0d53b/SEDML/1E_weinstein_2000.rdf
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"
xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:semsim="http://www.bhi.washington.edu/SemSim#"
xmlns:dcterms="http://purl.org/dc/terms/">
<rdf:Description rdf:about="protocol1E_weinstein_2000.sedml#AE1.Cl_e">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_3">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_3">
<ro:part_of>
<rdf:Description rdf:about="#entity_4">
<ro:part_of>
<rdf:Description rdf:about="#entity_2">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_70982"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_17996"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>concentration of chloride in the portion of tissue fluid in epithelial cell of collecting
duct of renal tubule compartment
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1E_weinstein_2000.sedml#AE1.Cl_i">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_2">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_0">
<ro:part_of>
<rdf:Description rdf:about="#entity_1">
<ro:part_of rdf:resource="#entity_2"/>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_17996"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>concentration of chloride in the portion of cytosol in epithelial cell of collecting duct
of renal tubule compartment
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1E_weinstein_2000.sedml#AE1.J_Cl">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_4">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#process_0" dcterms:description="">
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_0">
<semsim:hasPhysicalEntityReference>
<rdf:Description rdf:about="#entity_5">
<ro:part_of rdf:resource="#entity_2"/>
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_84669"/>
</rdf:Description>
</semsim:hasPhysicalEntityReference>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasSinkParticipant>
<rdf:Description rdf:about="#sink_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_3"/>
</rdf:Description>
</semsim:hasSinkParticipant>
<semsim:hasSourceParticipant>
<rdf:Description rdf:about="#source_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_0"/>
</rdf:Description>
</semsim:hasSourceParticipant>
<semsim:name>Cl- flow from across basolateral plasma membrane</semsim:name>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00593"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>net flux (efflux) of chloride from portion of cytosol in epithelial cell of collecting duct
of renal tubule to portion of tissue fluid in epithelial cell of collecting duct of renal tubule compartment
across basolateral plasma membrane
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1E_weinstein_2000.sedml#environment.time">
<bqbiol:is rdf:resource="http://identifiers.org/opb/OPB_01023"/>
</rdf:Description>
<rdf:Description rdf:about="protocol1E_weinstein_2000.sedml#weinstein_2000_1E">
<ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_84669"/>
<ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
<ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
<ro:modelOf rdf:resource="http://purl.obolibrary.org/obo/PR_P23562"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_84669"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
<bqbiol:isTime rdf:resource="http://identifiers.org/opb/OPB_01023"/>
</rdf:Description>
</rdf:RDF>
