- Author:
- Soroush Safaei <ssaf006@aucklanduni.ac.nz>
- Date:
- 2017-02-06 19:40:26+13:00
- Desc:
- adding the BG
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/2b8/rawfile/faa0a0efd762adc4bb4f41e75f70ca994f48f9a0/BG/Diffusion_module.cellml
<?xml version='1.0'?>
<model name="StateDiagram" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="Units.cellml">
<units name="mol_per_m3" units_ref="mol_per_m3"/>
<units name="mol_per_m3_s" units_ref="mol_per_m3_s"/>
<units name="per_m" units_ref="per_m"/>
<units name="m_per_s" units_ref="m_per_s"/>
</import>
<component name="Diffusion">
<variable initial_value="0.5" name="q_Na_o" public_interface="out" units="mol_per_m3"/>
<variable initial_value="0.0" name="q_Na_i" public_interface="out" units="mol_per_m3"/>
<variable name="v_Re_o" public_interface="in" units="mol_per_m3_s"/>
<variable name="v_Re_i" public_interface="in" units="mol_per_m3_s"/>
<variable name="t" public_interface="out" units="second"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_Na_o</ci>
</apply>
<apply>
<minus/>
<ci>v_Re_o</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>q_Na_i</ci>
</apply>
<ci>v_Re_i</ci>
</apply>
</math>
</component>
<component name="module">
<variable name="q_Na_o" public_interface="in" units="mol_per_m3"/>
<variable name="q_Na_i" public_interface="in" units="mol_per_m3"/>
<variable name="v_Re_o" public_interface="out" units="mol_per_m3_s"/>
<variable name="v_Re_i" public_interface="out" units="mol_per_m3_s"/>
<variable initial_value="10.0" name="K_Re" units="m_per_s"/>
<variable initial_value="0.1" name="rho_o" units="per_m"/>
<variable initial_value="1.0" name="rho_i" units="per_m"/>
<variable name="t" public_interface="in" units="second"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>v_Re_o</ci>
<apply>
<times/>
<ci>K_Re</ci>
<ci>rho_o</ci>
<apply>
<minus/>
<ci>q_Na_o</ci>
<ci>q_Na_i</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>v_Re_i</ci>
<apply>
<times/>
<ci>K_Re</ci>
<ci>rho_i</ci>
<apply>
<minus/>
<ci>q_Na_o</ci>
<ci>q_Na_i</ci>
</apply>
</apply>
</apply>
</math>
</component>
<connection>
<map_components component_1="Diffusion" component_2="module"/>
<map_variables variable_1="t" variable_2="t"/>
<map_variables variable_1="q_Na_o" variable_2="q_Na_o"/>
<map_variables variable_1="q_Na_i" variable_2="q_Na_i"/>
<map_variables variable_1="v_Re_o" variable_2="v_Re_o"/>
<map_variables variable_1="v_Re_i" variable_2="v_Re_i"/>
</connection>
</model>
