semantic-annotation

Added some semgen annotated models (AnandR)

AnandR — 2019-04-05

Added some semgen annotated models (AnandR)

modified the backup models

Dewan Sarwar — 2019-03-18

modified the backup models

testing models for demonstration

Dewan Sarwar — 2019-03-14

testing models for demonstration

replaced portion of renal IDs with luminal ID

Dewan Sarwar — 2019-03-14

replaced portion of renal IDs with luminal ID

replaced luminal ID with portion of renal filtrate in proximal or distal tubule

Dewan Sarwar — 2019-03-14

replaced luminal ID with portion of renal filtrate in proximal or distal tubule

replaced with 74550 luminal id in weinstein_1995.cellml and chang_fujita_b_1999.cellml model

Dewan Sarwar — 2019-03-12

replaced with 74550 luminal id in weinstein_1995.cellml and chang_fujita_b_1999.cellml model

fix up fma and chebi uris in the blood capillary flux model

Dewan Sarwar — 2019-03-11

fix up fma and chebi uris in the blood capillary flux model

added blood capillary flux model

Dewan Sarwar — 2019-03-11

added blood capillary flux model

replaced cell ID of epithelial cell of esophageal cardiac gland with cardiac muscle cell

Dewan Sarwar — 2019-02-26

replaced cell ID of epithelial cell of esophageal cardiac gland with cardiac muscle cell

lung models with protein IDs as mediators

Dewan Sarwar — 2019-02-12

lung models with protein IDs as mediators

updated protein ID of sneyd_1995 model

Dewan Sarwar — 2019-02-12

updated protein ID of sneyd_1995 model

updated PR identifier in bindschadler and warren model

Dewan Sarwar — 2019-02-12

updated PR identifier in bindschadler and warren model

replaced IP3 agonist with IP3 receptor antagonist

Dewan Sarwar — 2019-02-12

replaced IP3 agonist with IP3 receptor antagonist

updated niederer and hinch model

Dewan Sarwar — 2019-02-12

updated niederer and hinch model

removed I_TRPN variable in the niederer and hinch model

Dewan Sarwar — 2019-02-12

removed I_TRPN variable in the niederer and hinch model

updated Hodgkin and Huxley modelof qualifier

Dewan Sarwar — 2019-02-12

updated Hodgkin and Huxley modelof qualifier

updated located_in in Hodgkin and asthagiri model

Dewan Sarwar — 2019-02-12

updated located_in in Hodgkin and asthagiri model

updated located_in qualifier in some models

Dewan Sarwar — 2019-02-12

updated located_in qualifier in some models

change PR id for warren model

Dewan Sarwar — 2019-02-07

change PR id for warren model

change PR id for niederer model

Dewan Sarwar — 2019-02-07

change PR id for niederer model

change PR id for hinch model

Dewan Sarwar — 2019-02-07

change PR id for hinch model

removed a redundant weinstein_1995 model

Dewan Sarwar — 2019-02-07

removed a redundant weinstein_1995 model

CellML models with Maxwell's suggestion

Dewan Sarwar — 2019-02-07

CellML models with Maxwell's suggestion

Fix up FMA URIs

Dewan Sarwar — 2019-01-31

Fix up FMA URIs

updated modelof qualifier

Dewan Sarwar — 2019-01-31

updated modelof qualifier

Testing with Max's suggested way of annotation for weinstein_1995_max model

Dewan Sarwar — 2019-01-31

Testing with Max's suggested way of annotation for weinstein_1995_max model

adding UTF-8

Dewan Sarwar — 2019-01-22

adding UTF-8

aded ? in line 1

Dewan Sarwar — 2019-01-22

aded ? in line 1

added namespaces in the rdf namespace block

Dewan Sarwar — 2019-01-22

added namespaces in the rdf namespace block

adding the removed namepsaces

Dewan Sarwar — 2019-01-22

adding the removed namepsaces

removed some namepsaces

Dewan Sarwar — 2019-01-22

removed some namepsaces

Fix up reuse of concentration RDF things in flux RDF section

Dewan Sarwar — 2019-01-09

Fix up reuse of concentration RDF things in flux RDF section

renames entity names in model.cellml

Dewan Sarwar — 2019-01-09

renames entity names in model.cellml

reused entity names in model.cellml

Dewan Sarwar — 2019-01-09

reused entity names in model.cellml

Updated model.cellml

Dewan Sarwar — 2019-01-09

Updated model.cellml

Testing model.cellml

Dewan Sarwar — 2019-01-09

Testing model.cellml

testing model.cellml

Dewan Sarwar — 2019-01-07

testing model.cellml

separated GI model

Dewan Sarwar — 2018-12-31

separated GI model

updated weinstein human baso model

Dewan Sarwar — 2018-12-19

updated weinstein human baso model

removed some annotations and make backup of those models for future reference

Dewan Sarwar — 2018-12-18

removed some annotations and make backup of those models for future reference

updated FMA and CHEBI URIs

Dewan Sarwar — 2018-12-18

updated FMA and CHEBI URIs

changed annotation of Na+ for chang_fujita_b, mackenzie, and weinstein model

Dewan Sarwar — 2018-12-18

changed annotation of Na+ for chang_fujita_b, mackenzie, and weinstein model

verified cooling and siebert model

Dewan Sarwar — 2018-12-07

verified cooling and siebert model

Annotated models by semgen community

Dewan Sarwar — 2018-12-07

Annotated models by semgen community

added annotated models by semgen community

Dewan Sarwar — 2018-12-07

added annotated models by semgen community

added 5A & B protocol in the weinstein_1995.sedml

Dewan Sarwar — 2018-10-18

added 5A & B protocol in the weinstein_1995.sedml

updated FMA and CHEBI URIs of eskandari and mackenzie model

Dewan Sarwar — 2018-10-17

updated FMA and CHEBI URIs of eskandari and mackenzie model

annotated current for eskandari and mackenzie model

Dewan Sarwar — 2018-10-17

annotated current for eskandari and mackenzie model

Fix up FMA uri for chang_fujita_b_1999_aNaCl

Dewan Sarwar — 2018-10-12

Fix up FMA uri for chang_fujita_b_1999_aNaCl

changed metadata id to maintain same name with cellml model name

Dewan Sarwar — 2018-10-12

changed metadata id to maintain same name with cellml model name