Location: rat flatmap @ b35f726b87e9 / keast_bladder.json

Author:
David Brooks <dave@bcs.co.nz>
Date:
2021-06-04 12:06:37+12:00
Desc:
Move connectivity from `properties` file into separate JSON files, adding some annotation to the Keast bladder model.
Permanent Source URI:
https://staging.physiomeproject.org/workspace/62f/rawfile/b35f726b87e99aa70a9c5242dbfdd37eb5305b28/keast_bladder.json

{
    "id": "keast-bladder",
    "source": "https://apinatomy.org/uris/models/keast-bladder",
    "paths": [
        {
            "id": "path_1",
            "type": "sensory",
            "path": "P1, P2, P3, P4, P5, P6, P7, P8, P9, P10, P11, P12, P13, P14, P15, P16",
            "route": "urinary_5, S50_L6_B, S50_S1_B, S50_L6_T, S50_S1_T, S45_L6, S45_S1, C1, C2, S44_L6, S44_S1, (S33_L6, S34_L6, S37_L6, S39_L6, S42_L6, S33_S1, S34_S1, S37_S1, S39_S1, S42_S1)",
            "nerves": "keast_2"
        },
        {
            "id": "path_2",
            "type": "sensory",
            "path": "P17, P18, P19, P20, P21, P22, P23, P24, P25, P26, P27, P28, P29, P30, P31, P32, P33, P34, P35, P36, P37",
            "route": "(urinary_6, urinary_7, urinary_8, urinary_9, urinary_10, urinary_11), keast_3, S50_L6_B, S50_S1_B, S50_L6_T, S50_S1_T, S45_L6, S45_S1, C3, C4, S44_L6, (S33_L6, S34_L6, S37_L6, S39_L6, S42_L6, S33_S1, S34_S1, S37_S1, S39_S1, S42_S1)",
            "nerves": "keast_4, keast_1",
            "models": "ilxtr:neuron-type-keast-10"
        },
        {
            "id": "path_3",
            "type": "somatic",
            "path": "P38, P39, P40, P41",
            "route": "(S41_2_L5, S41_2_L6), C5, C6, S43_L5, S43_L6, S50_L5_T, S50_L6_T, S50_L5_B, S50_L6_B, urinary_5",
            "nerves": "keast_2",
            "models": "ilxtr:neuron-type-keast-9"
        },
        {
            "id": "path_4",
            "type": "para-pre",
            "path": "P42, P43, P44, P45",
            "route": "(S39_L6, S39_S1), C7, C9, S43_L6, S43_S1, S50_L6_T, S50_S1_T, S50_L6_B, S50_S1_B, C8, keast_3",
            "nerves": "keast_4"
        },
        {
            "id": "path_5",
            "type": "para-post",
            "path": "P46, P47, P48, P49",
            "route": "keast_3, C8, (urinary_6, urinary_7, urinary_9, urinary_10)",
            "nerves": "keast_1"
        },
        {
            "id": "path_6",
            "type": "sensory",
            "path": "P50, P51, P52, P53, P54, P55, P56, P57, P58, P59, P60, P61, P62, P63, P64, P65, P66, P67, P69, P70",
            "route": "(urinary_6, urinary_7, urinary_8, urinary_9, urinary_10, urinary_11), keast_3, keast_6, S50_L1_B, S50_L2_B, S50_L1_T, S50_L2_T, S45_L1, S45_L2, C10, C11, S44_L1, S44_L2, (S33_L1, S34_L1, S37_L1, S39_L1, S42_L1, S33_L2, S34_L2, S37_L2, S39_L2, S42_L2)",
            "nerves": "keast_7, keast_5, keast_1"
        },
        {
            "id": "path_7",
            "type": "symp-pre",
            "path": "P71, P72, P75, P76",
            "route": "(S39_L1, S39_L2), C12, C14, S43_L1, S43_L2, S50_L1_T, S50_L2_T, S50_L1_B, S50_L2_B, S48_L1, S48_L2, S49_L1, S49_L2, S50_L1_B, S50_L2_B, keast_6, C13, keast_3",
            "nerves": "keast_7, keast_5"
        },
        {
            "id": "path_8",
            "type": "symp-post",
            "path": "P73, P74",
            "route": "keast_3, C13, (urinary_7, urinary_10)",
            "nerves": "keast_1"
        },
        {
            "id": "path_9",
            "type": "symp-pre",
            "path": "P77, P78, P79, P80",
            "route": "(S39_L1, S39_L2), C15, C17, S43_L1, S43_L2, S50_L1_T, S50_L2_T, S50_L1_B, S50_L2_B, S48_L1, S48_L2, S49_L1, S49_L2, S50_L1_B, S50_L2_B, C16, keast_6",
            "nerves": "keast_7"
        },
        {
            "id": "path_10",
            "type": "symp-post",
            "path": "P81, P82",
            "route": "keast_6, C16, keast_3, (urinary_7, urinary_10)",
            "nerves": "keast_5, keast_1"
        },
        {
            "id": "path_11",
            "type": "symp-pre",
            "path": "P83, P84, P85, P86, P87, P88, P89, P90, P91, P92, P93",
            "route": "(S39_L1, S39_L2), C26, C27, S43_L1, S43_L2, S50_L1_T, S50_L2_T, S50_L1_B, S50_L2_B, S48_L1, S48_L2, C18, spinal_47, C19, spinal_47, C20, spinal_47, C21, spinal_47, C22, spinal_47, C23,  C24, spinal_47, C25, (S46_T12, S46_T13, S46_L1, S46_L2, S46_L3, S46_L4, S46_L5, S46_L6)"
        },
        {
            "id": "path_12",
            "type": "symp-post",
            "path": "P94, P95, P96, P97, P98, P99, P100, P101, P102, P103",
            "route": "(S46_T12, S46_T13, S46_L1, S46_L2, S46_L3, S46_L4, S46_L5, S46_L6), C18, spinal_47, C19, spinal_47, C20, spinal_47, C21, spinal_47, C22, spinal_47, C23, spinal_47, C24, spinal_47, C25, spinal_47, S46_S1, S49_S1, S49_L6, S50_S1_B, S50_L6_B, keast_3, (urinary_8, urinary_11)",
            "nerves": "keast_4, keast_1"
        }
    ]
}