- Author:
- nima <nafs080@aucklanduni.ac.nz>
- Date:
- 2021-06-10 08:38:04+12:00
- Desc:
- minor change
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/648/rawfile/7c8af54fa19b6744d5767ececd5af471d82e77a1/Fig6-plot.py
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
import matplotlib.patches as patches
from matplotlib.patches import Rectangle
import sys
# import plot_func
import os
data = pd.read_csv('Fig06.csv')
X1 = data[data.keys()[4]]*1000
Y1 = data[data.keys()[2]]
Y2 = data[data.keys()[0]]
Y3 = data[data.keys()[3]]
Y4 = data[data.keys()[1]]
Y5 = data[data.keys()[7]]*1e6
Y6 = data[data.keys()[5]]*1e6
Y7 = data[data.keys()[8]]*1e6
Y8 = data[data.keys()[6]]*1e6
Y9 = data[data.keys()[11]]*1000/57
Y10 = data[data.keys()[9]]*1000/57
Y11 = data[data.keys()[12]]*1000/57
Y12 = data[data.keys()[10]]*1000/57
plt.figure(figsize=(16,14))
plt.subplot(2,2,1)
plt.plot(X1, Y1, 'navy',linestyle='-', label = 'CTRL', linewidth= 3)
plt.plot(X1, Y2, 'red',linestyle='-', label = 'Block 50%', linewidth= 3)
plt.plot(X1, Y3, 'green',linestyle='-', label = 'Block 75%', linewidth= 3)
plt.plot(X1, Y4, 'purple',linestyle='-', label = 'Block 90%', linewidth= 3)
plt.gca().add_patch(Rectangle((440,-65),695,30,linewidth=2,edgecolor='black', linestyle= '--',facecolor='none'))
plt.grid()
plt.xlim(0, 1800)
plt.ylim(-70,30)
plt.xticks(np.arange(0,1800, 500))
# plt.xlabel ('time(ms)',fontsize=16)
plt.tick_params(axis='both', labelsize=14)
plt.ylabel ('V$_m$ (mV)', fontsize=16)
plt.title('A', loc= 'left', fontsize='20')
# plt.legend(bbox_to_anchor=(0., 1.02, 1.02, 0.1), loc='best',fontsize=14,
# ncol=10, mode="expand")
plt.subplot(2,2,2)
plt.plot(X1, Y1, 'navy',linestyle='-', label = 'CTRL', linewidth= 3)
plt.plot(X1, Y2, 'red',linestyle='-', label = 'Block 50%', linewidth= 3)
plt.plot(X1, Y3, 'green',linestyle='-', label = 'Block 75%', linewidth= 3)
plt.plot(X1, Y4, 'purple',linestyle='-', label = 'Block 90%', linewidth= 3)
plt.grid()
plt.xlim(445, 1120)
plt.ylim(-63,-35)
# plt.xlabel ('time(ms)',fontsize=16)
plt.tick_params(axis='both', labelsize=14)
plt.ylabel ('V$_m$ (mV)', fontsize=16)
plt.title('B', loc= 'left', fontsize='20')
# plt.legend(bbox_to_anchor=(0., 1.02, 1.02, 0.1), loc='best',fontsize=14,
# ncol=10, mode="expand")
plt.subplot(2,2,3)
plt.plot(X1, Y5, 'navy',linestyle='-', label = 'CTRL', linewidth= 3)
plt.plot(X1, Y6, 'red',linestyle='-', label = 'Block 50%', linewidth= 3)
plt.plot(X1, Y7, 'green',linestyle='-', label = 'Block 75%', linewidth= 3)
plt.plot(X1, Y8, 'purple',linestyle='-', label = 'Block 90%', linewidth= 3)
plt.grid()
plt.xlim(0, 1800)
plt.xticks(np.arange(0,1800, 500))
plt.ylim(50,450)
plt.xlabel ('Time (ms)',fontsize=16)
plt.tick_params(axis='both', labelsize=14)
plt.ylabel ('[Ca$^{2+}]_i$ (nM)', fontsize=16)
plt.title('C', loc= 'left', fontsize='20')
# plt.legend(bbox_to_anchor=(0., 1.02, 1.02, 0.1), loc='best',fontsize=14,
# ncol=10, mode="expand")
plt.subplot(2,2,4)
plt.plot(X1, Y9, 'navy',linestyle='-', label = 'CTRL', linewidth= 3)
plt.plot(X1, Y10, 'red',linestyle='-', label = 'Block 50%', linewidth= 3)
plt.plot(X1, Y11, 'green',linestyle='-', label = 'Block 75%', linewidth= 3)
plt.plot(X1, Y12, 'purple',linestyle='-', label = 'Block 90%', linewidth= 3)
plt.grid()
plt.xlim(445, 1130)
plt.ylim(-0.16, 0.05)
plt.yticks(np.arange(-0.15,0.01, 0.05))
plt.xlabel ('Time (ms)',fontsize=16)
plt.tick_params(axis='both', labelsize=14)
plt.ylabel ('I$_{NaCa}$ (pA/pF)', fontsize=16)
plt.title('D', loc= 'left', fontsize='20')
plt.legend(bbox_to_anchor=(0., 0.85, 1, 0.1), loc='best',fontsize=14,
ncol=10, mode="expand")
plt.tight_layout(pad=0.4, w_pad=0.5, h_pad=1.0)
plt.savefig('C:/Nima/ABI/Physiome Journal/sinus/Python_codes/figure6.png')
plt.show()
#~ plt.legend(loc=0)
