- Author:
- WeiweiAi <wai484@aucklanduni.ac.nz>
- Date:
- 2022-10-19 10:24:37+13:00
- Desc:
- Add readme to link the documentation on overleaf.
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/701/rawfile/6741283829975cd4f084159e7734dcbece29f7b1/Simulation/src/gateVramp_sim.py
# To reproduce the data needed for clamping experiments in associated original paper,
import VrampExp
import imp
imp.reload(VrampExp)
Vinit=[-160]
paraKeys=['Clamp_parameters/Cai','Clamp_parameters/Nai','Clamp_parameters/Ki',]
paras=[8.97e-5,4,140]
outKeys=['outputs/b_inf','outputs/g_inf','outputs/tau_b','outputs/tau_g','outputs/d_inf',
'outputs/f_inf','outputs/tau_d','outputs/tau_f2','outputs/m_inf','outputs/h_inf',
'outputs/tau_m','outputs/tau_h','outputs/q_inf','outputs/r_inf','outputs/tau_q',
'outputs/tau_r1','outputs/tau_r2','outputs/p_inf','outputs/k_inf','outputs/tau_p',
'outputs/tau_k1','outputs/tau_k2','outputs/s_inf','outputs/x_inf','outputs/tau_s',
'outputs/tau_x','outputs/y_inf','outputs/tau_y','outputs/n_inf','outputs/c_inf',
'outputs/tau_c1','outputs/tau_c2',]
sedversions=['0','1','2','3']
for i, sedversion in enumerate(sedversions):
simfile='../Voltage_ramp_experiment_%s.sedml' % sedversion
simFign='Vramp_%s' % sedversion
VrampExp.VrampExp(simFign,simfile,Vinit,paraKeys,paras,outKeys)
