Location: BG_CMDN_buffer @ 1081cad018cf / parameter_finder / kinetic_parameters_CMDN_buffer.py

Author:
Shelley Fong <sfon036@UoA.auckland.ac.nz>
Date:
2025-03-28 12:50:00+13:00
Desc:
adding rdf
Permanent Source URI:
https://staging.physiomeproject.org/workspace/822/rawfile/1081cad018cf2b033f0b9fe5b054cfbec6d62bac/parameter_finder/kinetic_parameters_CMDN_buffer.py
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import math
import numpy as np

def kinetic_parameters(M, include_type2_reactions, dims, V):
    fast_kinetic_constant = 1e6

    Km_CMDN = 2.38e-3 # unit    mM

    kf_CMDN = fast_kinetic_constant
    kr_CMDN = fast_kinetic_constant * Km_CMDN

    W = [1, V['V_myo'], V['V_myo'], V['V_myo']]
    k_kinetic = [kf_CMDN, kr_CMDN]
    N_cT = []
    K_C = []

    return (k_kinetic, N_cT, K_C, W)