https://staging.physiomeproject.org/workspace/82c en-us BG_Kr Bond graph model of the rapid rectifying potassium channel, fitted to the Kernik 2019 model. Updating vols with LRd values and updating parameters https://staging.physiomeproject.org/workspace/82c/@@file/39d63a7bbd611123d2e3c960f684d4796b63d4ae Updating vols with LRd values and updating parameters Shelley Fong 2024-12-16 Adding svg https://staging.physiomeproject.org/workspace/82c/@@file/be137f5ee57945c2df3827572b92300dd6745c88 Adding svg Shelley Fong 2024-11-29 Updating cellml and sedml https://staging.physiomeproject.org/workspace/82c/@@file/f138b490161bff04355a6192db8727af23f79e76 Updating cellml and sedml Shelley Fong 2024-11-12 Fixing link https://staging.physiomeproject.org/workspace/82c/@@file/91d6314c2a76be17a27b1d4acbdf449a87cc9bfa Fixing link Shelley Fong 2024-11-06 Adding exposure files https://staging.physiomeproject.org/workspace/82c/@@file/cad6f96238c195b27cd235c55dc63d6fd88deed5 Adding exposure files Shelley Fong 2024-11-06 Updating to LRd 34.4 pL cell parameters https://staging.physiomeproject.org/workspace/82c/@@file/f45e6de671edd766ff0cf3a153306d9ca117a209 Updating to LRd 34.4 pL cell parameters Shelley Fong 2022-07-06 Changing units to s for alpha and beta gate parameters https://staging.physiomeproject.org/workspace/82c/@@file/78241c53362eaa4197ccb6597082fae1be26b9ee Changing units to s for alpha and beta gate parameters Shelley Fong 2022-04-22 With updated parameters and code https://staging.physiomeproject.org/workspace/82c/@@file/67266b00747a6102220860125ba26f54799fa2f8 With updated parameters and code Shelley Fong 2022-04-22 Updating stoich matrices to include sqrt(Ko) dependence of g_Kr https://staging.physiomeproject.org/workspace/82c/@@file/422d31608d3701de0cd9f3eca875b2b8d92150cd Updating stoich matrices to include sqrt(Ko) dependence of g_Kr Shelley Fong 2022-04-22 Fixing number of gate particles and storing in comp environment https://staging.physiomeproject.org/workspace/82c/@@file/edc50b777bb6c5baebe1fa305327727039684579 Fixing number of gate particles and storing in comp environment Shelley Fong 2022-04-20 Changing method of number of channels present. Guess density. Using SA of human iPSC for Kernik. Updating volumes https://staging.physiomeproject.org/workspace/82c/@@file/c8ae8c3f312721e2b18b2d697f9be59a66025119 Changing method of number of channels present. Guess density. Using SA of human iPSC for Kernik. Updating volumes Shelley Fong 2022-04-11 Changing method of number of channels present. Guess density. Using SA of human iPSC for Kernik. Updating volumes https://staging.physiomeproject.org/workspace/82c/@@file/dcd789dea1bfbcb4a54a61240b2c5c08175b96ef Changing method of number of channels present. Guess density. Using SA of human iPSC for Kernik. Updating volumes Shelley Fong 2022-04-11 guess density https://staging.physiomeproject.org/workspace/82c/@@file/54790befc6c29a7d35bd2c351a07c807f6080848 guess density Shelley Fong 2022-04-08 Undo https://staging.physiomeproject.org/workspace/82c/@@file/5a115952837bce7caf151927a46ee188d608f2f7 Undo Shelley Fong 2022-04-08 Fitting to kinetic hybrid model of LRd + Kernik https://staging.physiomeproject.org/workspace/82c/@@file/76ae45281db99010aa2932398f2f76d46f4b8687 Fitting to kinetic hybrid model of LRd + Kernik Shelley Fong 2022-04-08 Fitting to kinetic hybrid model of LRd + Kernik https://staging.physiomeproject.org/workspace/82c/@@file/2155728cf586e6a10c9faf117d35fb93b71c2fac Fitting to kinetic hybrid model of LRd + Kernik Shelley Fong 2022-04-08 Fitting to kinetic hybrid model of LRd + Kernik https://staging.physiomeproject.org/workspace/82c/@@file/99f4484b50d15ad17237628a8b2d69d3beb34824 Fitting to kinetic hybrid model of LRd + Kernik Shelley Fong 2022-04-08 Patch clamp test vs Kernik for single channel, with params adjusted for a Kernik19 cell https://staging.physiomeproject.org/workspace/82c/@@file/f7da52350c2de057b835f464dd46f6eabbbeae0d Patch clamp test vs Kernik for single channel, with params adjusted for a Kernik19 cell Shelley Fong 2022-04-07 Fixing Cm and refitting to Kernik19 https://staging.physiomeproject.org/workspace/82c/@@file/2a4b92f05900f2a4b8f8170861d2c165de1b0d01 Fixing Cm and refitting to Kernik19 Shelley Fong 2022-04-07 Change channel density to match Kernik https://staging.physiomeproject.org/workspace/82c/@@file/9ea0182e8cf05f4ef75ba7cd9a5c8c5ce2509d49 Change channel density to match Kernik Shelley Fong 2022-04-05 Change channel density to match Kernik https://staging.physiomeproject.org/workspace/82c/@@file/63a12fd889c0930dd34097d0f9ea05f00ea518b7 Change channel density to match Kernik Shelley Fong 2022-04-05 Changing Kr to be Kernik formulation https://staging.physiomeproject.org/workspace/82c/@@file/dec2ae3403bc1bb34fcc90e788b01b2ba4106c55 Changing Kr to be Kernik formulation Shelley Fong 2022-04-05 Changing Kr to be Kernik formulation https://staging.physiomeproject.org/workspace/82c/@@file/59c0b40516263092373ebf6e1665e3a3e3535df8 Changing Kr to be Kernik formulation Shelley Fong 2022-04-05 Changing Kr to be Kernik formulation https://staging.physiomeproject.org/workspace/82c/@@file/01ca9939f451cce92a9a5fc82a40f805b8fd0d6c Changing Kr to be Kernik formulation Shelley Fong 2022-04-05 With new densities found from fitting Pan - K + Kr to Clancy model https://staging.physiomeproject.org/workspace/82c/@@file/4b67713e245c22dcfb7786ae629de4c86f4819fa With new densities found from fitting Pan - K + Kr to Clancy model Shelley Fong 2022-04-01 With new densities found from fitting Pan - K + Kr to Clancy model https://staging.physiomeproject.org/workspace/82c/@@file/e95514b3ab1f0bb93bd69dff14346e3e15668e1f With new densities found from fitting Pan - K + Kr to Clancy model Shelley Fong 2022-04-01 With new densities found from fitting Pan - K + Kr + Ks to Viswanathan data https://staging.physiomeproject.org/workspace/82c/@@file/62eafa5e752d7f66ffdef2c20c88da690e2cc29c With new densities found from fitting Pan - K + Kr + Ks to Viswanathan data Shelley Fong 2022-04-01 Fixing units in cellml, and therefore channel density https://staging.physiomeproject.org/workspace/82c/@@file/8728af65931b5ca7821acc7c86f9c9bb021087b8 Fixing units in cellml, and therefore channel density Shelley Fong 2022-03-29 With channel density checked using patch clamp against kinetic model, and G_GHK fitted better https://staging.physiomeproject.org/workspace/82c/@@file/d0ecd7a7b4fe4b853db2483ffff2089a214e65c8 With channel density checked using patch clamp against kinetic model, and G_GHK fitted better Shelley Fong 2022-03-28 Updating Kr channel density to literature value (Chinn and Clancy) https://staging.physiomeproject.org/workspace/82c/@@file/9e7fd7552b3bff0b4b8e8ac5a0b9171f7be76b64 Updating Kr channel density to literature value (Chinn and Clancy) Shelley Fong 2022-03-22 With doubled channel density, so parameters are new https://staging.physiomeproject.org/workspace/82c/@@file/a5d6026872e1340306b21d06dc0cb79d0a72ad91 With doubled channel density, so parameters are new Shelley Fong 2022-03-16 With doubled channel density, so parameters are new https://staging.physiomeproject.org/workspace/82c/@@file/23a5cbd7a5e770e88aa6a1bcc95ebc79d399affc With doubled channel density, so parameters are new Shelley Fong 2022-03-16 Changing Cm to be equal to Pan value, which is physiological. Not Clancy01 value https://staging.physiomeproject.org/workspace/82c/@@file/5924e927ac442b6ef855531b3630c61d3f0d4f7e Changing Cm to be equal to Pan value, which is physiological. Not Clancy01 value Shelley Fong 2022-03-14 rename folder https://staging.physiomeproject.org/workspace/82c/@@file/4945aae885e146525d9aa58580b3a20cbf8caef5 rename folder Shelley Fong 2022-03-14 Remove vol_o https://staging.physiomeproject.org/workspace/82c/@@file/a25561cf7d7df818cccf025a902b6a88c9fc9c9c Remove vol_o Shelley Fong 2022-03-08 Various formatting changes https://staging.physiomeproject.org/workspace/82c/@@file/b47647457ed574ad590d438289d4ff541910941e Various formatting changes Shelley Fong 2022-03-08 Various formatting changes https://staging.physiomeproject.org/workspace/82c/@@file/cd6efd810e2e3c95125cd54537687fd46ce3932e Various formatting changes Shelley Fong 2022-03-08 fix equation for q_mem https://staging.physiomeproject.org/workspace/82c/@@file/d11b41b6aaed7a1484e969eaced8c8b1499947d8 fix equation for q_mem Shelley Fong 2022-03-07 fix equation for q_mem https://staging.physiomeproject.org/workspace/82c/@@file/b7a49c2df131736bbef489c7130e8f42e1a499fb fix equation for q_mem Shelley Fong 2022-03-07 Rename comp https://staging.physiomeproject.org/workspace/82c/@@file/bbddcb595864a8efe4af486f9698e7529106b02d Rename comp Shelley Fong 2022-03-07 Renaming channel https://staging.physiomeproject.org/workspace/82c/@@file/7e58499aefeb2162202aeeba006376d21962160a Renaming channel Shelley Fong 2022-03-07 Changing Xi to X_i, and adding python param finder code https://staging.physiomeproject.org/workspace/82c/@@file/73d6bc1016edb1be3ceadf6cccc4aa05ef251e58 Changing Xi to X_i, and adding python param finder code Shelley Fong 2022-03-03 Fix equation finding K Kappa and update parameters https://staging.physiomeproject.org/workspace/82c/@@file/ae54ed237584007ec1fb64b38d528cf2476c0869 Fix equation finding K Kappa and update parameters Shelley Fong 2022-02-28 reorganising moduleS https://staging.physiomeproject.org/workspace/82c/@@file/6b413e6789e3895511c62527545b963ef7fae27a reorganising moduleS Shelley Fong 2022-02-24 Add https://staging.physiomeproject.org/workspace/82c/@@file/bd8f1a808e21ed308da7eedca222fd1ae09cd992 Add Shelley Fong 2022-02-24 Init https://staging.physiomeproject.org/workspace/82c/@@file/aadbebe27406c33ebf789d0bdff39b2f3f190ec5 Init Shelley Fong 2022-02-24