https://staging.physiomeproject.org/workspace/839 en-us FCU_cardiacAP_composite This directory contains bond graph models of channels relevant to the creation and management of an action potential in a cardiac myocyte. These individual components are imported into one composite file using git submodules. The provided CellML file in the main directory is modelled after the Kernik et al 2019 cardiac model, but without the transient outward channel. Channels that were modelled under the Luo-Rudy 1994 formulation were also added. This bond graph model also needs an external stimulus to activate action potentials. Update SERCA https://staging.physiomeproject.org/workspace/839/@@file/87f41474d3f05aeab29a337406a982903190fe9b Update SERCA Shelley Fong 2022-06-13 Changing tolerances to get rid of complex numbers https://staging.physiomeproject.org/workspace/839/@@file/e1ded53e6bc367687282deabdcb2fc5db0d780aa Changing tolerances to get rid of complex numbers Shelley Fong 2022-06-08 Removing RyR mentions https://staging.physiomeproject.org/workspace/839/@@file/d4e4fe4b1b153b708cd034abb98759ce0f1f7135 Removing RyR mentions Shelley Fong 2022-06-03 Removing RyR https://staging.physiomeproject.org/workspace/839/@@file/0c50f3514f300dd61debbe5b7555ed8acc34a2ae Removing RyR Shelley Fong 2022-06-03 Removing old files https://staging.physiomeproject.org/workspace/839/@@file/8fdc9cee58a5cdfba865a1c520d41f3f2824746a Removing old files Shelley Fong 2022-05-19 Modifying exposure files to not include CaSR handling https://staging.physiomeproject.org/workspace/839/@@file/4968e873f403205c6cbf7db430edfb7a8a941d8f Modifying exposure files to not include CaSR handling Shelley Fong 2022-05-19 Removing Ca fluxes between cytosol and SR from this FCU https://staging.physiomeproject.org/workspace/839/@@file/f4d1e338a31bc1ed2afc4a7f02e12a36c8a18dc7 Removing Ca fluxes between cytosol and SR from this FCU Shelley Fong 2022-05-19 Remaining updated https://staging.physiomeproject.org/workspace/839/@@file/8b7ee2c3d6c3e43f1891e880504bd618105479b9 Remaining updated Shelley Fong 2022-05-05 Remaining updated https://staging.physiomeproject.org/workspace/839/@@file/1b68311b373c1590bfd7560f1f477a1ef33518fd Remaining updated Shelley Fong 2022-05-05 CaB and Ca_leak updated https://staging.physiomeproject.org/workspace/839/@@file/50eec1a67a27837d7537caabc359bc616773938a CaB and Ca_leak updated Shelley Fong 2022-05-05 CMDN updated https://staging.physiomeproject.org/workspace/839/@@file/45401802e0879f00da53b185a33d91c0cb3cd454 CMDN updated Shelley Fong 2022-05-05 fix caption 2 https://staging.physiomeproject.org/workspace/839/@@file/c5165920f452a690ecfc800d60386a2434e6b013 fix caption 2 Shelley Fong 2022-05-05 fix caption https://staging.physiomeproject.org/workspace/839/@@file/b5755dc19990a8161259bb316e25bd93f5a67d2b fix caption Shelley Fong 2022-05-04 fix URL https://staging.physiomeproject.org/workspace/839/@@file/e6c95493a298ee8d2f54a7b915f3c1a8cd771ef9 fix URL Shelley Fong 2022-05-04 Edits https://staging.physiomeproject.org/workspace/839/@@file/a56c6efb785d470cc3e09b64b790a18bf79de30f Edits Shelley Fong 2022-05-04 Adding exposure files https://staging.physiomeproject.org/workspace/839/@@file/63e1fd4bbb45a87c2b3ad38430a6d3e4bbcba595 Adding exposure files Shelley Fong 2022-05-04 Rename matlab file https://staging.physiomeproject.org/workspace/839/@@file/174ee5da185a9a8254e6c9affcbeb67b30c81190 Rename matlab file Shelley Fong 2022-05-04 Rename folder https://staging.physiomeproject.org/workspace/839/@@file/df6a25c1d47865155cbadb0b15eb86809cf04bf6 Rename folder Shelley Fong 2022-05-03 with fixed channel gate amounts for funny current https://staging.physiomeproject.org/workspace/839/@@file/570118d5f2a78c6043edeb9786241c4d8b54bef9 with fixed channel gate amounts for funny current Shelley Fong 2022-05-03 Adding correct MATLAB export https://staging.physiomeproject.org/workspace/839/@@file/00419dd18dd25c770c57c58494c30bde38d13833 Adding correct MATLAB export Shelley Fong 2022-05-03 Removing old files https://staging.physiomeproject.org/workspace/839/@@file/c822194a8b4e67093ad04f9a5f0dc26ca2040823 Removing old files Shelley Fong 2022-05-03 With all Kernik19 channels present except transient outward https://staging.physiomeproject.org/workspace/839/@@file/cf6a9eef38e66ff937c16061b847a9a64584b35e With all Kernik19 channels present except transient outward Shelley Fong 2022-05-03 With updates on gating state moles https://staging.physiomeproject.org/workspace/839/@@file/8495fcb81093de205873417fe5b2cf6274a41658 With updates on gating state moles Shelley Fong 2022-04-21 With fixed way to find number of channels and gating states https://staging.physiomeproject.org/workspace/839/@@file/515aec4992e89aaf673a1bfc915905edc4eff36a With fixed way to find number of channels and gating states Shelley Fong 2022-04-14 Write out nil values of remaining kappa/K that are in the main directory, but not in a specific model https://staging.physiomeproject.org/workspace/839/@@file/de284c445764e63a346228e5cebe70456a62f008 Write out nil values of remaining kappa/K that are in the main directory, but not in a specific model Shelley Fong 2022-03-21 Updating Cm to be physiological value, taken from Pan18 https://staging.physiomeproject.org/workspace/839/@@file/d5c77719071d4a1b361c062671a2b4131c1c23f9 Updating Cm to be physiological value, taken from Pan18 Shelley Fong 2022-03-14 Huge fix to volume vector W in finding parameters https://staging.physiomeproject.org/workspace/839/@@file/3de390ca3d0f8f8652c2f22a9040ca7c959e42cc Huge fix to volume vector W in finding parameters Shelley Fong 2022-03-10 Adding MATLAB file, which solves https://staging.physiomeproject.org/workspace/839/@@file/6a590a8c3ffc9bef6da4cc6eb3357d28a4b0fe63 Adding MATLAB file, which solves Shelley Fong 2022-03-08 Adding whole cellml and sedml files which technically compile on Opencor https://staging.physiomeproject.org/workspace/839/@@file/b25fba6f169f666134244d09591b80747357bd84 Adding whole cellml and sedml files which technically compile on Opencor Shelley Fong 2022-03-08 With imports and general tidy up, but still not useable yet https://staging.physiomeproject.org/workspace/839/@@file/56052b05ac4b30a74a34f47b9b42e78d9f615906 With imports and general tidy up, but still not useable yet Shelley Fong 2022-03-07 removin funny https://staging.physiomeproject.org/workspace/839/@@file/e39dd71d908e3ebb5d3e2b10a518c2f70a501157 removin funny Shelley Fong 2022-03-07 Rename NaB https://staging.physiomeproject.org/workspace/839/@@file/e2652464a5a640bee86a585a77cfcc6a5f9e64a3 Rename NaB Shelley Fong 2022-03-07 Rename CaB https://staging.physiomeproject.org/workspace/839/@@file/eb9ef0604e81b270b82c5ac6eef64ced07d202eb Rename CaB Shelley Fong 2022-03-07 Renaming funny https://staging.physiomeproject.org/workspace/839/@@file/3faa377c09c6b88998eccd5844380e8d148b028a Renaming funny Shelley Fong 2022-03-07 Renaming funny https://staging.physiomeproject.org/workspace/839/@@file/b88d39199ba728a1a1fbe737f2c46879f2273920 Renaming funny Shelley Fong 2022-03-07 Renaming channels https://staging.physiomeproject.org/workspace/839/@@file/5eef50e4752add81df42edac540d7bac0adaf302 Renaming channels Shelley Fong 2022-03-07 Renaming channels https://staging.physiomeproject.org/workspace/839/@@file/86dba1d6981ac3c15988b36481b6ec46a91225a9 Renaming channels Shelley Fong 2022-03-07 Renaming folders https://staging.physiomeproject.org/workspace/839/@@file/08c2cc902d17e070873938afdfd86e9d2b52e9d5 Renaming folders Shelley Fong 2022-03-03 Adding components via submodules https://staging.physiomeproject.org/workspace/839/@@file/87564193defc3b3bd4cf4511898691bdac89ea6d Adding components via submodules Shelley Fong 2022-03-03