Location: BG_cGMP @ 6a4e3e640452 / yang_cGMP.cellml

Author:
Shelley Fong <sfon036@UoA.auckland.ac.nz>
Date:
2022-05-13 13:42:24+12:00
Desc:
forgot to update forward matrix
Permanent Source URI:
https://staging.physiomeproject.org/workspace/856/rawfile/6a4e3e640452c398c30d4a60e8d041cc8896c6bd/yang_cGMP.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="cGMP" xmlns="http://www.cellml.org/cellml/1.0#" xmlns:cellml="http://www.cellml.org/cellml/1.0#">
    <units name="per_microM_per_s">
        <unit exponent="-1.0" units="micromolar"/>
        <unit units="per_s"/>
    </units>
    <units name="micromolar">
        <unit exponent="-1.0" units="litre"/>
        <unit prefix="micro" units="mole"/>
    </units>
    <units name="per_s">
        <unit exponent="-1.0" units="second"/>
    </units>
    <units name="millivolt">
        <unit prefix="milli" units="volt"/>
    </units>
    <units name="per_nM_per_s">
        <unit exponent="-1.0" units="nanomolar"/>
        <unit units="per_s"/>
    </units>
    <units name="microM_per_s">
        <unit units="micromolar"/>
        <unit units="per_s"/>
    </units>
    <units name="nanomolar">
        <unit prefix="nano" units="mole"/>
        <unit exponent="-1.0" units="litre"/>
    </units>
    <units name="nm_per_s">
        <unit units="per_s"/>
        <unit units="nanomolar"/>
    </units>
    <component name="environment">
        <variable name="time" public_interface="out" units="second"/>
        <variable name="V_max_sGC" public_interface="in" units="microM_per_s"/>
        <variable initial_value="0" name="E_5c" public_interface="out" units="dimensionless"/>
        <variable name="cGMP" public_interface="in" units="micromolar"/>
        <variable name="k_pde" public_interface="in" units="per_s"/>
    </component>
    <component name="c_GMP">
        <variable initial_value="0.8520" name="V_max_sGC" public_interface="out" units="microM_per_s"/>
        <variable name="E_5c" public_interface="in" units="dimensionless"/>
        <variable initial_value="0" name="cGMP" public_interface="out" units="micromolar"/>
        <variable name="V_max_pde" units="microM_per_s"/>
        <variable initial_value="2" name="K_m_pde" units="micromolar"/>
        <variable initial_value="0.0195" name="k_pde" public_interface="out" units="per_s"/>
        <variable name="time" public_interface="in" units="second"/>
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>time</ci>
                    </bvar>
                    <ci>cGMP</ci>
                </apply>
                <apply>
                    <minus/>
                    <apply>
                        <times/>
                        <ci>V_max_sGC</ci>
                        <ci>E_5c</ci>
                    </apply>
                    <apply>
                        <divide/>
                        <apply>
                            <times/>
                            <ci>cGMP</ci>
                            <ci>V_max_pde</ci>
                        </apply>
                        <apply>
                            <plus/>
                            <ci>K_m_pde</ci>
                            <ci>cGMP</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>V_max_pde</ci>
                <apply>
                    <times/>
                    <ci>k_pde</ci>
                    <ci>cGMP</ci>
                </apply>
            </apply>
        </math>
    </component>
    <connection>
        <map_components component_1="environment" component_2="c_GMP"/>
        <map_variables variable_1="time" variable_2="time"/>
        <map_variables variable_1="V_max_sGC" variable_2="V_max_sGC"/>
        <map_variables variable_1="E_5c" variable_2="E_5c"/>
        <map_variables variable_1="cGMP" variable_2="cGMP"/>
        <map_variables variable_1="k_pde" variable_2="k_pde"/>
    </connection>
</model>