Location: Modeling the Recruitment and Synchronization of SMCs (Koenigsberger et al. 2004) @ 99a19b7935b0 / Components / buildsrc / Cai.txt

Author:
WeiweiAi <wai484@aucklanduni.ac.nz>
Date:
2022-05-18 14:27:44+12:00
Desc:
Add original data and adjust the initial values to match Fig3
Permanent Source URI:
https://staging.physiomeproject.org/workspace/874/rawfile/99a19b7935b0b970efb7be1e058c3c09e38c9617/Components/buildsrc/Cai.txt
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def model Cai as
    def import using "../cellLib/Components/units.cellml" for
        unit uM using unit uM;
        unit uM_per_s using unit uM_per_s;
    enddef;

    def comp Cai as
        var J_VOCCi: uM_per_s {pub: in};
        var J_NCXi: uM_per_s {pub: in};
        var J_SERCAi: uM_per_s {pub: in};
        var J_CICRi: uM_per_s {pub: in};
        var J_PMCAi: uM_per_s {pub: in};
        var J_leaki: uM_per_s {pub: in};
        var J_IP3i: uM_per_s {pub: in};
        var t: second {pub: in};
        var ci_init: uM {pub: in};
        var c_i: uM {init: ci_init, pub: out};

        ode(c_i, t) = J_IP3i+J_VOCCi-J_NCXi-J_SERCAi+J_CICRi-J_PMCAi+J_leaki;

    enddef;

enddef;