Location: A review of cardiac cellular electrophysiology models @ 1b3862589abf / dojo-presentation / js / dojo / dojox / json / ref.js

Author:
David Nickerson <david.nickerson@gmail.com>
Date:
2021-09-17 15:50:49+12:00
Desc:
tweak html formatting
Permanent Source URI:
https://staging.physiomeproject.org/workspace/a1/rawfile/1b3862589abf79ae9119ee0b5e99a8b785d762e1/dojo-presentation/js/dojo/dojox/json/ref.js

dojo.provide("dojox.json.ref");
dojo.require("dojo.date.stamp");

// summary:
// Adds advanced JSON {de}serialization capabilities to the base json library.
// This enhances the capabilities of dojo.toJson and dojo.fromJson,
// adding referencing support, date handling, and other extra format handling.
// On parsing, references are resolved. When references are made to
// ids/objects that have been loaded yet, the loader function will be set to
// _loadObject to denote a lazy loading (not loaded yet) object. 

dojox.json.ref.resolveJson = function(/*Object*/ root,/*Object?*/ args){
	// summary:
	// 		Indexes and resolves references in the JSON object.
	// description:
	// 		A JSON Schema object that can be used to advise the handling of the JSON (defining ids, date properties, urls, etc)
	//
	// root:
	//		The root object of the object graph to be processed
	// args:
	//		Object with additional arguments:
	//
	// The *index* parameter.
	//		This is the index object (map) to use to store an index of all the objects. 
	// 		If you are using inter-message referencing, you must provide the same object for each call.
	// The *defaultId* parameter.
	//		This is the default id to use for the root object (if it doesn't define it's own id)
	//	The *idPrefix* parameter.
	//		This the prefix to use for the ids as they enter the index. This allows multiple tables 
	// 		to use ids (that might otherwise collide) that enter the same global index. 
	// 		idPrefix should be in the form "/Service/".  For example,
	//		if the idPrefix is "/Table/", and object is encountered {id:"4",...}, this would go in the
	//		index as "/Table/4".
	//	The *idAttribute* parameter.
	//		This indicates what property is the identity property. This defaults to "id"
	// The *schemas* parameter
	//		This provides a map of schemas, from which prototypes can be retrieved
	// The *loader* parameter
	//		This is a function that is called added to the reference objects that can't be resolved (lazy objects)
	// return:
	//		An object, the result of the processing
	args = args || {};
	var idAttribute = args.idAttribute || 'id';
	var prefix = args.idPrefix || '/'; 
	var index = args.index || {}; // create an index if one doesn't exist
	var ref,reWalk=[];
	var pathResolveRegex = /^(.*\/)?(\w+:\/\/)|[^\/\.]+\/\.\.\/|^.*\/(\/)/;

	function walk(it,stop,defaultId){
		// this walks the new graph, resolving references and making other changes
	 	var update, val, id = it[idAttribute] || defaultId;
	 	if(id !== undefined){
	 		id = (prefix + id).replace(pathResolveRegex,'$2$3');
	 	}
	 	var target = it;
		if(id !== undefined){ // if there is an id available...
			it.__id = id;
			// if the id already exists in the system, we should use the existing object, and just 
			// update it... as long as the object is compatible
			if(index[id] && ((it instanceof Array) == (index[id] instanceof Array))){ 
				target = index[id];
				delete target.$ref; // remove this artifact
				update = true;
			}else{
			 	var proto = args.schemas && (!(it instanceof Array)) && // won't try on arrays to do prototypes, plus it messes with queries 
	 					(val = id.match(/^(.+\/)[^\.\[]*$/)) && // if it has a direct table id (no paths)
	 					(val = args.schemas[val[1]]) && val.prototype; // and if has a prototype
				if(proto){
					// if the schema defines a prototype, that needs to be the prototype of the object
					var F = function(){};
					F.prototype = proto;
					target = new F();
				}
			}
			index[id] = target; // add the prefix, set _id, and index it
		}


		for(var i in it){
			if((typeof (val=it[i]) =='object') && val){
				ref=val.$ref;
				if(ref){ // a reference was found
					var stripped = ref.replace(/\\./g, '@').replace(/"[^"\\\n\r]*"/g, '');// trim it
					if(/[\w\[\]\.\$ \/\r\n\t]/.test(stripped) && !/\=|((^|\W)new\W)/.test(stripped)){
						// make sure it is a safe reference
						delete it[i];// remove the property so it doesn't resolve to itself in the case of id.propertyName lazy values
						var path = ref.match(/(^\.*[^\.\[]+)([\.\[].*)?/); // divide along the path
						if((ref = (path[1]=='$' || path[1]=='this') ? root : index[(prefix + path[1]).replace(pathResolveRegex,'$2$3')]) &&  // a $ indicates to start with the root, otherwise start with an id
						// // starting point was found, use eval to resolve remaining property references
						// // need to also make reserved words safe by replacing with index operator
							(ref = path[2] ? eval('ref' + path[2].replace(/\.([^\.]+)/g,'["$1"]')) : ref)){
							// otherwise, no starting point was found (id not found), if stop is set, it does not exist, we have
							// unloaded reference, if stop is not set, it may be in a part of the graph not walked yet,
							// we will wait for the second loop
							val = ref;
						}else{
							if(!stop){
								var rewalking;
								if(!rewalking){
									reWalk.push(target); // we need to rewalk it to resolve references
								}
								rewalking = true; // we only want to add it once
							}else{
								val = walk(val, false, val.$ref);
								// create a lazy loaded object
								val._loadObject = args.loader;
							}
						}
					}
				}else{
					if(!stop){ // if we are in stop, that means we are in the second loop, and we only need to check this current one,
						// further walking may lead down circular loops
						val = walk(val,reWalk==it,id && (id + ('[' + dojo._escapeString(i) + ']')));
					}
				}
			}
			it[i] = val;
			if(target!=it){// performance guard				
				var old = target[i];
				target[i] = val; // update the target
				if(update && val !== old){ // only update if it changed
					if(index.onUpdate){
						index.onUpdate(target,i,old,val); // call the listener for each update
					}
				}
			}
		}

		if(update){
			// this means we are updating, we need to remove deleted
			for(i in target){
				if(!it.hasOwnProperty(i) && i != '__id' && !(target instanceof Array && isNaN(i))){
					if(index.onUpdate){
						index.onUpdate(target,i,target[i],undefined); // call the listener for each update
					}
					delete target[i];
					while(target instanceof Array && target.length && target[target.length-1] === undefined){
						// shorten the target if necessary
						target.length--;
					}
				}
			}
		}else{
			if(index.onLoad){
				index.onLoad(target);
			}
		}
		return target;
	}
	if(root && typeof root == 'object'){
		root = walk(root,false,args.defaultId); // do the main walk through
		walk(reWalk,false); // re walk any parts that were not able to resolve references on the first round
	}
	return root;
};


dojox.json.ref.fromJson = function(/*String*/ str,/*Object?*/ args){
// summary:
// 		evaluates the passed string-form of a JSON object.
//
// str:
//		a string literal of a JSON item, for instance:
//			'{ "foo": [ "bar", 1, { "baz": "thud" } ] }'
// args: See resolveJson
//
// return:
//		An object, the result of the evaluation
	function ref(target){ // support call styles references as well
		return {$ref:target};
	}
	var root = eval('(' + str + ')'); // do the eval
	if(root){
		return this.resolveJson(root, args);
	}
	return root;
};

dojox.json.ref.toJson = function(/*Object*/ it, /*Boolean?*/ prettyPrint, /*Object?*/ idPrefix){
	// summary:
	//		Create a JSON serialization of an object.
	//		This has support for referencing, including circular references, duplicate references, and out-of-message references
	// 		id and path-based referencing is supported as well and is based on http://www.json.com/2007/10/19/json-referencing-proposal-and-library/.
	//
	// it:
	//		an object to be serialized.
	//
	// prettyPrint:
	//		if true, we indent objects and arrays to make the output prettier.
	//		The variable dojo.toJsonIndentStr is used as the indent string
	//		-- to use something other than the default (tab),
	//		change that variable before calling dojo.toJson().
	//
	// idPrefix: The prefix that has been used for the absolute ids
	//
	// return:
	//		a String representing the serialized version of the passed object.
	var useRefs = dojox.json.ref.useRefs;
	//	dojox.json.ref.useRefs:
	// 		Indicates if the serializer should be encouraged to use references to existing objects.
	// 		If this is not true, the serializer will only use references when necessary (for circular references).
	idPrefix = idPrefix || ''; // the id prefix for this context
	var paths={};
	function serialize(it,path,_indentStr){
		if(typeof it == 'object' && it){
			var value;
			if(it instanceof Date){ // properly serialize dates
				return '"' + dojo.date.stamp.toISOString(it,{zulu:true}) + '"';
			}
			var id = it.__id;
			if(id){ // we found an identifiable object, we will just serialize a reference to it... unless it is the root
				if(path != '$' && (useRefs || paths[id])){
					var ref = id; // a pure path based reference, leave it alone

					if(id.charAt(0)!='$'){
						if(id.substring(0, idPrefix.length) == idPrefix){ // see if the reference is in the current context
							// a reference with a prefix matching the current context, the prefix should be removed
							ref = id.substring(idPrefix.length);
						}else{
							// a reference to a different context, assume relative url based referencing
							ref = id;
						}
					}
					return serialize({
						$ref: ref
					});
				}
				path = id;
			}else{
				it.__id = path; // we will create path ids for other objects in case they are circular

				paths[path] = it;// save it here so they can be deleted at the end
			}
			_indentStr = _indentStr || "";
			var nextIndent = prettyPrint ? _indentStr + dojo.toJsonIndentStr : "";
			var newLine = prettyPrint ? "\n" : "";
			var sep = prettyPrint ? " " : "";

			if(it instanceof Array){
				var res = dojo.map(it, function(obj,i){
					var val = serialize(obj, path + '[' + i + ']', nextIndent);
					if(typeof val != "string"){
						val = "undefined";
					}
					return newLine + nextIndent + val;
				});
				return "[" + res.join("," + sep) + newLine + _indentStr + "]";
			}

			var output = [];
			for(var i in it){
				if(it.hasOwnProperty(i)){
					var keyStr;
					if(typeof i == "number"){
						keyStr = '"' + i + '"';
					}else if(typeof i == "string" && i.charAt(0) != '_'){
						keyStr = dojo._escapeString(i);
					}else{
						// skip non-string or number keys
						continue;
					}
					var val = serialize(it[i],path+(i.match(/^[a-zA-Z]\w*$/) ? // can we use simple .property syntax?
														('.' + i) : // yes, otherwise we have to escape it
														('[' + dojo._escapeString(i) + ']')),nextIndent);
					if(typeof val != "string"){
						// skip non-serializable values
						continue;
					}
					output.push(newLine + nextIndent + keyStr + ":" + sep + val);
				}
			}
			return "{" + output.join("," + sep) + newLine + _indentStr + "}";
		}else if(typeof it == "function" && dojox.json.ref.serializeFunctions){
			return it.toString();
		}

		return dojo.toJson(it); // use the default serializer for primitives
	}
	var json = serialize(it,'$','');
	for(i in paths)  {// cleanup the temporary path-generated ids
		delete paths[i].__id;
	}
	return json;
};
dojox.json.ref.useRefs=false;
dojox.json.ref.serializeFunctions=false;