Location: Main SLC Models @ c865ac2aa10c / SLC4A1.cellml

Author:
napakalas <yuda.munarko@gmail.com>
Date:
2023-02-20 19:44:20+13:00
Desc:
add two main models
Permanent Source URI:
https://staging.physiomeproject.org/workspace/ae0/rawfile/c865ac2aa10c0897aa51a7f438accf1bb64dcccb/SLC4A1.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model cmeta:id="metaid0" name="SLC4A1_0" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#">
    <units name="per_sec_per_fmol_per_L">
        <unit exponent="-1.0" units="second"/>
        <unit exponent="-1.0" units="fmol_per_L"/>
    </units>
    <units name="uM">
        <unit exponent="-1.0" units="litre"/>
        <unit prefix="micro" units="mole"/>
    </units>
    <units name="per_sec">
        <unit exponent="-1.0" units="second"/>
    </units>
    <units name="mM">
        <unit prefix="milli" units="mole"/>
        <unit exponent="-1.0" units="litre"/>
    </units>
    <units name="mM_per_sec">
        <unit exponent="-1.0" units="second"/>
        <unit units="mM"/>
    </units>
    <units name="fC">
        <unit prefix="femto" units="coulomb"/>
    </units>
    <units name="fmol_per_sec">
        <unit exponent="-1.0" units="second"/>
        <unit units="fmol"/>
    </units>
    <units name="J_per_mol">
        <unit units="joule"/>
        <unit exponent="-1.0" units="mole"/>
    </units>
    <units name="C_per_mol">
        <unit units="coulomb"/>
        <unit exponent="-1.0" units="mole"/>
    </units>
    <units name="uM_per_sec">
        <unit units="uM"/>
        <unit exponent="-1.0" units="second"/>
    </units>
    <units name="fmol_per_L_per_sec">
        <unit exponent="-1.0" units="second"/>
        <unit units="fmol_per_L"/>
    </units>
    <units name="per_fmol">
        <unit exponent="-1.0" units="fmol"/>
    </units>
    <units name="fmol_per_L">
        <unit prefix="femto" units="mole"/>
        <unit exponent="-1.0" units="litre"/>
    </units>
    <units name="fF">
        <unit prefix="femto" units="farad"/>
    </units>
    <units name="fS">
        <unit prefix="femto" units="siemens"/>
    </units>
    <units name="fmol">
        <unit prefix="femto" units="mole"/>
    </units>
    <units name="pL">
        <unit prefix="pico" units="litre"/>
    </units>
    <units name="J_per_K_per_mol">
        <unit units="joule"/>
        <unit exponent="-1.0" units="mole"/>
        <unit exponent="-1.0" units="kelvin"/>
    </units>
    <units name="fA">
        <unit prefix="femto" units="ampere"/>
    </units>
    <component name="SLC4A1">
        <variable cmeta:id="SLC4A1.K_Ai" initial_value="1" name="K_Ai" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Ai" initial_value="1" name="q_Ai" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_Ao" initial_value="100" name="K_Ao" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Ao" initial_value="1" name="q_Ao" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_Bi" initial_value="10" name="K_Bi" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Bi" initial_value="1" name="q_Bi" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_Bo" initial_value="100" name="K_Bo" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Bo" initial_value="1" name="q_Bo" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_Ei" initial_value="1" name="K_Ei" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Ei" initial_value="1" name="q_Ei" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_Eo" initial_value="1000" name="K_Eo" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_Eo" initial_value="1" name="q_Eo" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_EAi" initial_value="1" name="K_EAi" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_EAi" initial_value="1" name="q_EAi" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_EAo" initial_value="1" name="K_EAo" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_EAo" initial_value="1" name="q_EAo" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_EBi" initial_value="1" name="K_EBi" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_EBi" initial_value="1" name="q_EBi" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.K_EBo" initial_value="1" name="K_EBo" public_interface="out" units="per_fmol"/>
        <variable cmeta:id="SLC4A1.q_EBo" initial_value="1" name="q_EBo" public_interface="out" units="fmol"/>
        <variable cmeta:id="SLC4A1.kappa_Re1" initial_value="1" name="kappa_Re1" public_interface="out" units="fmol_per_sec"/>
        <variable cmeta:id="SLC4A1.kappa_Re2" initial_value="1" name="kappa_Re2" public_interface="out" units="fmol_per_sec"/>
        <variable cmeta:id="SLC4A1.kappa_Re3" initial_value="1" name="kappa_Re3" public_interface="out" units="fmol_per_sec"/>
        <variable cmeta:id="SLC4A1.kappa_Re4" initial_value="1" name="kappa_Re4" public_interface="out" units="fmol_per_sec"/>
        <variable cmeta:id="SLC4A1.kappa_Re5" initial_value="1" name="kappa_Re5" public_interface="out" units="fmol_per_sec"/>
        <variable cmeta:id="SLC4A1.kappa_Re6" initial_value="1" name="kappa_Re6" public_interface="out" units="fmol_per_sec"/>
    </component>
    <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.q_Ai">
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                                </rdf:Description>
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                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_7">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_5" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00340" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.q_EAi">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_13">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_8" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00340" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" description="SLC4A1_Re4" rdf:about="#SLC4A1.kappa_Re4">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_23">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_12" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_01296" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.K_EBi">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_16">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#entity_10">
                            <ro:part_of xmlns:ro="http://www.obofoundry.org/ro/ro.owl#" rdf:resource="#entity_1" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                            <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/chebi/CHEBI:62965" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                        </rdf:Description>
                    </semsim:physicalPropertyOf>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00079" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.K_EAo">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_14">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_9" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00079" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" modelName="SLC4A1_parameters" rdf:about="#metaid0">
            <semsim:modelName xmlns:semsim="http://www.bhi.washington.edu/SemSim#">SLC4A1_0</semsim:modelName>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.K_Bi">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_4">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_4" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00079" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.q_Ao">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_3">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#entity_2">
                            <ro:part_of xmlns:ro="http://www.obofoundry.org/ro/ro.owl#" rdf:resource="#entity_3" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                            <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/chebi/CHEBI:17234" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                        </rdf:Description>
                    </semsim:physicalPropertyOf>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00340" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.K_Eo">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_10">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#entity_7">
                            <ro:part_of xmlns:ro="http://www.obofoundry.org/ro/ro.owl#" rdf:resource="#entity_3" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                            <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/chebi/CHEBI:39000" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                        </rdf:Description>
                    </semsim:physicalPropertyOf>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00079" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.q_Eo">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_11">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_7" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00340" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.K_Ao">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_2">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_2" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00079" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" description="SLC4A1_Re1" rdf:about="#SLC4A1.kappa_Re1">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_20">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_12" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_01296" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#SLC4A1.q_EBi">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_17">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_10" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_00340" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
        <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" description="SLC4A1_Re5" rdf:about="#SLC4A1.kappa_Re5">
            <semsim:isComputationalComponentFor xmlns:semsim="http://www.bhi.washington.edu/SemSim#">
                <rdf:Description xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="#property_24">
                    <semsim:physicalPropertyOf xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="#entity_12" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                    <semsim:hasPhysicalDefinition xmlns:semsim="http://www.bhi.washington.edu/SemSim#" rdf:resource="https://identifiers.org/opb/OPB_01296" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"/>
                </rdf:Description>
            </semsim:isComputationalComponentFor>
        </rdf:Description>
    </rdf:RDF>
</model>