- Author:
- Weiwei Ai <wai484@aucklanduni.ac.nz>
- Date:
- 2024-10-02 16:14:11+13:00
- Desc:
- Make some Ks params_BG_FIG10.cellml consistent with params_BG.cellml. Rerun the simulation and plot the figures.
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/b65/rawfile/8cf5166b2490399a0188bbdc5256707af9196a8a/src/mergeData_GLUT2.py
import os
current_dir = os.path.dirname(os.path.abspath(__file__))
csv_files = []
model_name = 'GLUT2_BG'
path_=os.path.join(current_dir, '../Facilitated transporter/CellMLV2/sim_results/')
for model_id in range(250):
sed_model_id = model_name+f'_{model_id}_io'
csv_files.append(path_+'report_task_'+f'{sed_model_id}'+'.csv')
# only remove the first line of the second and subsequent files
# if the file exists, delete it first
io_csv = path_+f'{model_name}_ss_io.csv'
if os.path.exists(io_csv):
os.remove(io_csv)
with open(io_csv, 'w') as file:
for csv_file in csv_files:
with open(csv_file, 'r') as f:
if csv_file == csv_files[0]:
file.write(f.read())
else:
f.readline()
file.write(f.read())
csv_files = []
for model_id in range(250):
sed_model_id = model_name+f'_{model_id}_oi'
csv_files.append(path_+'report_task_'+f'{sed_model_id}'+'.csv')
# only remove the first line of the second and subsequent files
oi_csv = path_+f'{model_name}_ss_oi.csv'
if os.path.exists(oi_csv):
os.remove(oi_csv)
with open(oi_csv, 'w') as file:
for csv_file in csv_files:
with open(csv_file, 'r') as f:
if csv_file == csv_files[0]:
file.write(f.read())
else:
f.readline()
file.write(f.read())
