- Author:
- Shelley Fong <sfon036@UoA.auckland.ac.nz>
- Date:
- 2025-02-18 14:29:20+13:00
- Desc:
- Adding units submodule
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/c78/rawfile/c692331ac0e1f0dfa2220b6524d89d34c4928242/params_BG.cellml
<?xml version='1.0' encoding='UTF-8'?>
<model name="params_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="./units.cellml">
<units name="per_fmol" units_ref="per_fmol"/>
<units name="C_per_mol" units_ref="C_per_mol"/>
<units name="fmol_per_s" units_ref="fmol_per_sec"/>
<units name="fmol" units_ref="fmol"/>
<units name="J_per_K_mol" units_ref="J_per_K_per_mol"/>
<units name="mM" units_ref="mM"/>
<units name="pL" units_ref="pL"/>
<units name="fA" units_ref="fA"/>
<units name="fF" units_ref="fF"/>
</import>
<units name="volt_per_s">
<unit exponent="-1" units="second"/>
<unit units="volt"/>
</units>
<component name="params_BG">
<variable initial_value="8.31" name="R" public_interface="out" units="J_per_K_mol"/>
<variable initial_value="293" name="T" public_interface="out" units="kelvin"/>
<variable initial_value="96485" name="F" public_interface="out" units="C_per_mol"/>
<variable initial_value="1e-08" name="K_Cli" public_interface="out" units="per_fmol"/>
<variable name="q_Cli" public_interface="out" units="fmol"/>
<variable initial_value="1e-08" name="K_Clo" public_interface="out" units="per_fmol"/>
<variable name="q_Clo" public_interface="out" units="fmol"/>
<variable initial_value="1e-06" name="K_HCO3i" public_interface="out" units="per_fmol"/>
<variable name="q_HCO3i" public_interface="out" units="fmol"/>
<variable initial_value="1e-06" name="K_HCO3o" public_interface="out" units="per_fmol"/>
<variable name="q_HCO3o" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_1" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_1" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_2" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_2" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_3" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_3" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_4" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_4" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_5" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_5" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_6" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_6" public_interface="out" units="fmol"/>
<variable name="V0_Vm" public_interface="out" units="volt"/>
<variable initial_value="1" name="z_zf1" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="z_zr1" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="z_zf2" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="z_zr2" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="kappa_r1" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r2" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r3" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r4" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r5" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r6" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r7" public_interface="out" units="fmol_per_s"/>
<variable initial_value="20" name="Cli" units="mM"/>
<variable initial_value="100" name="Clo" units="mM"/>
<variable initial_value="10e-3" name="HCO3i" units="mM"/>
<variable initial_value="1e-12" name="HCO3o" units="mM"/>
<variable initial_value="8.5e5" name="V_i" units="pL"/>
<variable initial_value="8.5e5" name="V_o" units="pL"/>
<variable name="t" public_interface="out" units="second"/>
<variable initial_value="-0.05" name="V_E" public_interface="out" units="volt"/>
<variable initial_value="1e-3" name="dt" units="second"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>V0_Vm</ci>
<ci>V_E</ci>
</apply>
<apply>
<eq/>
<ci>q_Cli</ci>
<apply>
<times/>
<ci>Cli</ci>
<ci>V_i</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_Clo</ci>
<apply>
<times/>
<ci>Clo</ci>
<ci>V_o</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_HCO3i</ci>
<apply>
<times/>
<ci>HCO3i</ci>
<ci>V_i</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_HCO3o</ci>
<apply>
<times/>
<ci>HCO3o</ci>
<ci>V_o</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>V_E</ci>
</apply>
<cn cellml:units="volt_per_s">0</cn>
</apply>
</math>
</component>
</model>
