- Author:
- David Nickerson <david.nickerson@gmail.com>
- Date:
- 2025-08-14 23:06:51+12:00
- Desc:
- Adding eating and drinking protocols.
Updating the CellML model to include ability to tweak the input boundary conditions;
Adding SED-ML for a eating and drinking protocol;
Adding the SimulationVuer JSON description for the eating and drinking protocol;
Switching to using the SPARC portal mimetype for the SimulationVuer config file.
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/c99/rawfile/af37def9b5c012a1ca516b3c82a8dc704c670daa/map/BloodVolumeControl.properties.json
{
"features": {
"bvc/ID-0000001": {
"label": "Kidney",
"models": "cvs:functional.whole-body",
"hyperlinks": {
"flatmap": "FC:whole-body"
}
},
"bvc/ID-0000003": {
"label": "Tissue exchange system",
"models": "cvs:functional.tissue",
"hyperlinks": {
"flatmap": "FC:tissue"
}
},
"bvc/ID-0000004": {
"label": "GI tract",
"models": "cvs:functional.whole-body",
"hyperlinks": {
"flatmap": "FC:whole-body"
}
},
"bvc/ID-0000006": {
"label": "Tissue exchange system",
"models": "cvs:functional.tissue",
"hyperlinks": {
"flatmap": "FC:tissue"
}
},
"bvc/ID-0000007": {
"label": "Circulatory system",
"models": "cvs:functional.whole-body",
"hyperlinks": {
"flatmap": "FC:whole-body"
}
},
"bvc/ID-0000009": {
"name": "u_ac_H2O",
"label": "Chemical potential of water in arterial circulation"
},
"bvc/ID-0000010": {
"name": "q_vc_H2O_,_u_vc_osmotic",
"label": "Amount of water in venous circulation\nOsmotic pressure in venous circulation"
},
"bvc/ID-0000011": {
"name": "v_lv_H2O",
"label": "Flow of water in left ventricle"
},
"bvc/ID-0000012": {
"name": "v_cc_H2O",
"label": "Flow of water in capillary circulation"
},
"bvc/ID-0000017": {
"name": "v_pt_H2O",
"label": "Flow of water in proximal tubule of the kidney"
},
"bvc/ID-0000018": {
"label": "Tissue exchange system",
"models": "cvs:functional.tissue",
"hyperlinks": {
"flatmap": "FC:tissue"
}
},
"bvc/ID-0000019": {
"name": "q_pt_H2O_,_u_pt_osmotic",
"label": "Amount of water in proximal tubule of the kidney\nOsmotic pressure in proximal tubule of the kidney"
},
"bvc/ID-0000021": {
"name": "v_gl_H2O",
"label": "Flow of water in glomeruli of the kidney"
},
"bvc/ID-0000023": {
"name": "v_out2_H2O",
"label": "Flow of water out of kidney"
},
"bvc/ID-0000028": {
"name": "q_gi_H2O_,_u_gi_osmotic",
"label": "Amount of water in gastro-intestinal tract\nOsmotic pressure in gastro-intestinal tract"
},
"bvc/ID-0000029": {
"name": "v_in_H2O",
"label": "Flow of water into gastro-intestinal tract"
},
"bvc/ID-0000031": {
"name": "v_gi_H2O",
"label": "Flow of water in gastro-intestinal tract"
},
"bvc/ID-0000032": {
"name": "u_gi_Na+",
"label": "Chemical potential of sodium in gastro-intestinal tract"
},
"bvc/ID-0000033": {
"name": "v_in_Na+",
"label": "Flow of sodium into gastro-intestinal tract"
},
"bvc/ID-0000036": {
"name": "v_out1_Na+",
"label": "Flow of sodium out of gastro-intestinal tract"
},
"bvc/ID-0000038": {
"name": "q_vc_Na+",
"label": "Amount of sodium in venous circulation"
},
"bvc/ID-0000040": {
"name": "q_pt_Na+",
"label": "Amount of sodium in proximal tubule of the kidney"
},
"bvc/ID-0000041": {
"name": "v_out2_Na+",
"label": "Flow of sodium out of kidney"
},
"bvc/ID-0000043": {
"name": "v_gl_Na+",
"label": "Flow of sodium in glomeruli of the kidney"
},
"bvc/ID-0000050": {
"name": "v_out1_H2O",
"label": "Flow of water out of gastro-intestinal tract"
},
"bvc/ID-0000053": {
"name": "q_gi.epi_Na+",
"label": "Amount of sodium in epithelial cell of gastro-intestinal tract",
"models": "cvs:functional.cell",
"hyperlinks": {
"flatmap": "FC:cellular"
}
},
"bvc/ID-0000059": {
"name": "q_pt.epi_Na+",
"label": "Amount of sodium in epithelial cell of proximal tubule of the kidney",
"models": "cvs:functional.cell",
"hyperlinks": {
"flatmap": "FC:cellular"
}
},
"bvc/ID-0000064": {
"name": "v_gi.epi_Na+",
"label": "Flow of sodium in epithelial cell of gastro-intestinal tract"
},
"bvc/ID-0000065": {
"name": "v_gi_NKE",
"label": "Flow of sodium through NKE ATPase in gastro-intestinal tract"
},
"bvc/ID-0000066": {
"name": "v_pt.epi_Na+",
"label": "Flow of sodium in epithelial cell of proximal tubule of the kidney"
},
"bvc/ID-0000067": {
"name": "v_pt_NKE",
"label": "Flow of sodium through NKE ATPase in proximal tubule of the kidney"
}
}
}
