- Author:
- Shelley Fong <sfon036@UoA.auckland.ac.nz>
- Date:
- 2025-03-04 11:42:07+13:00
- Desc:
- Adding CellML
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/ca5/rawfile/3f7111fec2c03cdf160291973b2c01fe78f9d260/params_BG.cellml
<?xml version='1.0' encoding='UTF-8'?>
<model name="params_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="units/units.cellml">
<units name="fmol_per_s" units_ref="fmol_per_s"/>
<units name="J_per_K_mol" units_ref="J_per_K_mol"/>
<units name="C_per_mol" units_ref="C_per_mol"/>
<units name="per_fmol" units_ref="per_fmol"/>
<units name="fmol" units_ref="fmol"/>
<units name="per_s" units_ref="per_s"/>
<units name="pL" units_ref="pL"/>
<units name="uM" units_ref="uM"/>
<units name="mM" units_ref="mM"/>
</import>
<component name="params_BG">
<variable initial_value="8.31" name="R" public_interface="out" units="J_per_K_mol"/>
<variable initial_value="273.15" name="T" public_interface="out" units="kelvin"/>
<variable initial_value="96485" name="F" public_interface="out" units="C_per_mol"/>
<variable initial_value="1" name="K_Hi" public_interface="out" units="per_fmol"/>
<variable name="q_init_Hi" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_Ho" public_interface="out" units="per_fmol"/>
<variable name="q_init_Ho" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_Pi" public_interface="out" units="per_fmol"/>
<variable name="q_init_Pi" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_ATPi" public_interface="out" units="per_fmol"/>
<variable name="q_init_ATPi" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_ADPi" public_interface="out" units="per_fmol"/>
<variable name="q_init_ADPi" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_1" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_1" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_2" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_2" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_3" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_3" public_interface="out" units="fmol"/>
<variable initial_value="1" name="K_4" public_interface="out" units="per_fmol"/>
<variable initial_value="1" name="q_init_4" public_interface="out" units="fmol"/>
<variable initial_value="1" name="z_zr1" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="z_zr2" public_interface="out" units="dimensionless"/>
<variable initial_value="1" name="kappa_r1" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r2" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r3" public_interface="out" units="fmol_per_s"/>
<variable initial_value="1" name="kappa_r4" public_interface="out" units="fmol_per_s"/>
<variable initial_value="0.09" name="V_i" units="pL"/>
<variable initial_value="-0.05" name="V_E" public_interface="out" units="volt"/>
<variable initial_value="1" name="H_i" units="mM"/>
<variable initial_value="1e-5" name="H_o" units="mM"/>
<variable initial_value="1e-5" name="Pi_i" units="mM"/>
<variable initial_value="1e-5" name="ATP_i" units="mM"/>
<variable initial_value="1e-5" name="ADP_i" units="mM"/>
<variable initial_value="0.09" name="V_o" public_interface="out" units="pL"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>q_init_Ho</ci>
<apply>
<times/>
<ci>H_o</ci>
<ci>V_o</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_init_Hi</ci>
<apply>
<times/>
<ci>H_i</ci>
<ci>V_i</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_init_Pi</ci>
<apply>
<times/>
<ci>Pi_i</ci>
<ci>V_i</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_init_ATPi</ci>
<apply>
<times/>
<ci>ATP_i</ci>
<ci>V_i</ci>
</apply>
</apply>
<apply>
<eq/>
<ci>q_init_ADPi</ci>
<apply>
<times/>
<ci>ADP_i</ci>
<ci>V_i</ci>
</apply>
</apply>
</math>
</component>
</model>
