https://staging.physiomeproject.org/workspace/cad en-us NKE pump This workspace holds bond graph models of the sodium–potassium pump. update the params https://staging.physiomeproject.org/workspace/cad/@@file/464437442fe2529c8751a37cf98977cd34a4135b update the params Weiwei Ai 2026-05-22 Add more conditions https://staging.physiomeproject.org/workspace/cad/@@file/4ddb0e6a180b4316cc765d6b4256308fdf37cfb3 Add more conditions Weiwei Ai 2026-05-15 Add json files having sedml list https://staging.physiomeproject.org/workspace/cad/@@file/200a635f354e194b82ecf0c25993ebf788829e06 Add json files having sedml list Weiwei Ai 2026-01-14 Add sedmls to simulation v2 https://staging.physiomeproject.org/workspace/cad/@@file/cd2fcd5589278a761d2118f5ab2b192f16fce914 Add sedmls to simulation v2 Weiwei Ai 2026-01-14 add pe sedml for V2 https://staging.physiomeproject.org/workspace/cad/@@file/2f1c9ccddca6c85df84b1fa0273b7e84b95bf543 add pe sedml for V2 Weiwei Ai 2026-01-14 Add 6-state V2 steady state model https://staging.physiomeproject.org/workspace/cad/@@file/d6860a77f8dfa7d35152a72091063a4eff0e0da8 Add 6-state V2 steady state model Weiwei Ai 2026-01-14 Add V2 version of 6-state BG model with z1 on the R3 forward side https://staging.physiomeproject.org/workspace/cad/@@file/34cb4ca3c001c19f819180c7142866ad76d201ec Add V2 version of 6-state BG model with z1 on the R3 forward side Weiwei Ai 2026-01-14 Add json files for 6-state models https://staging.physiomeproject.org/workspace/cad/@@file/74a394879652820ff627e1be36d8b08618845af6 Add json files for 6-state models Weiwei Ai 2026-01-09 Add sedmls for 6-state models https://staging.physiomeproject.org/workspace/cad/@@file/c37c9e04142ce709e4153d15c5dcd3c351b6f52d Add sedmls for 6-state models Weiwei Ai 2026-01-09 Add sedmls and json for Terkildsen kinetic (ss of 15-state) model https://staging.physiomeproject.org/workspace/cad/@@file/8c5323b59efcbd4468598ae84a5bffa92a8d0a24 Add sedmls and json for Terkildsen kinetic (ss of 15-state) model Weiwei Ai 2026-01-08 Add sedmls for 15-state model and update json files https://staging.physiomeproject.org/workspace/cad/@@file/74631963d8f4bf2f338197901cc25fae28ed446d Add sedmls for 15-state model and update json files Weiwei Ai 2026-01-08 Add updated conditions https://staging.physiomeproject.org/workspace/cad/@@file/847b112bf1c985722deeac9e0c30b6949867eb4a Add updated conditions Weiwei Ai 2025-12-10 Add SS model of 4 state and parameters; https://staging.physiomeproject.org/workspace/cad/@@file/672e4fd2be869c81b5f1136c94381f7ebbebf755 Add SS model of 4 state and parameters; Weiwei Ai 2025-12-02 Add standalone SS mode of 6 state https://staging.physiomeproject.org/workspace/cad/@@file/9347c8346229fc3de85b5e127b4a1d88c4581077 Add standalone SS mode of 6 state Weiwei Ai 2025-11-19 add the missing Vm in ss model https://staging.physiomeproject.org/workspace/cad/@@file/c189f5fa77adfe113575e2e52f33ccdb74f788db add the missing Vm in ss model Weiwei Ai 2025-11-19 Add interfaces https://staging.physiomeproject.org/workspace/cad/@@file/76008123db9b051ffdd7b922725259fbf7f7c695 Add interfaces Weiwei Ai 2025-11-17 Use linearized faber_rudy potential data T=1000 ms https://staging.physiomeproject.org/workspace/cad/@@file/32f997c69d3c0ea76f56dd3d67464011353181aa Use linearized faber_rudy potential data T=1000 ms Weiwei Ai 2025-11-12 Change the upper bound of parameters. https://staging.physiomeproject.org/workspace/cad/@@file/c53671a0ce7d9af06350a2c1e72a1739536deb74 Change the upper bound of parameters. Weiwei Ai 2025-11-09 Loose range of params https://staging.physiomeproject.org/workspace/cad/@@file/4ecf17354049373abd3c428ae5ad1778503c569c Loose range of params Weiwei Ai 2025-11-08 add workers and fit refs https://staging.physiomeproject.org/workspace/cad/@@file/c069fb85dc3176095f4211354840f1f4a6817327 add workers and fit refs Weiwei Ai 2025-11-07 Add fit refs https://staging.physiomeproject.org/workspace/cad/@@file/d597a343f84ba8a696b58178a40ad3acbb3f1d1d Add fit refs Weiwei Ai 2025-11-07 Parallelizing pe https://staging.physiomeproject.org/workspace/cad/@@file/1da8f4c6d070ab1a44a448a7f9e6da1242307bee Parallelizing pe Weiwei Ai 2025-11-07 Add constraints on z1 and z2 https://staging.physiomeproject.org/workspace/cad/@@file/30c4948d234c3feef49a04d72f622732bb2faa85 Add constraints on z1 and z2 Weiwei Ai 2025-11-06 Modify the conditions to align with the experiments https://staging.physiomeproject.org/workspace/cad/@@file/7304560122c143da2e2118c6466d104624d25357 Modify the conditions to align with the experiments Weiwei Ai 2025-11-04 Add exp condition json files https://staging.physiomeproject.org/workspace/cad/@@file/2b7a9d03b4a50bcdfe4c3c5b14c9abe298f873f1 Add exp condition json files Weiwei Ai 2025-10-31 Add processed original data https://staging.physiomeproject.org/workspace/cad/@@file/cac2ff2e5d1102f4ecf0644241d3074862dfd559 Add processed original data Weiwei Ai 2025-10-31 Add 6-state SS model with free params https://staging.physiomeproject.org/workspace/cad/@@file/59a26f09a96e47aba947183c371d061c6dfa30b0 Add 6-state SS model with free params Weiwei Ai 2025-10-30 Add sedmls for fitting data https://staging.physiomeproject.org/workspace/cad/@@file/40bef0f19a5efda78395407ff96878256888d535 Add sedmls for fitting data Weiwei Ai 2025-10-28 update parameters with the fitting values https://staging.physiomeproject.org/workspace/cad/@@file/692555216ad9a6fe2faf0f26d173b3a6d87d2c26 update parameters with the fitting values Weiwei Ai 2025-10-28 Modify c_Nai for fig3c to avoid numerical error in 6-state ss model https://staging.physiomeproject.org/workspace/cad/@@file/23bac609f005fb0115c09dbe1fe822bff20f3ccc Modify c_Nai for fig3c to avoid numerical error in 6-state ss model Weiwei Ai 2025-10-28 Add correct 6-state steady-state model https://staging.physiomeproject.org/workspace/cad/@@file/bd6dd8dcd73f0e294c2a3c926c41876602c8f549 Add correct 6-state steady-state model Weiwei Ai 2025-10-28 Increased the upper bonds https://staging.physiomeproject.org/workspace/cad/@@file/858b71a20348328c5e27a5279f94c22f10ea9c12 Increased the upper bonds Weiwei Ai 2025-10-23 Reduce the bonds of params https://staging.physiomeproject.org/workspace/cad/@@file/7bce35953df9ca07d39bc65d845c350d2014c0c2 Reduce the bonds of params Weiwei Ai 2025-10-23 Modified the bonds of params https://staging.physiomeproject.org/workspace/cad/@@file/914a9cfed77a49c9ada6eeaef6e0324742ac9f0d Modified the bonds of params Weiwei Ai 2025-10-23 Fit 4-state model to each dataset independently https://staging.physiomeproject.org/workspace/cad/@@file/dc7d46c8d6e86c4d523f71d48548490732e4644b Fit 4-state model to each dataset independently Weiwei Ai 2025-10-22 Modified the charge numbers z1 and z2 https://staging.physiomeproject.org/workspace/cad/@@file/e67df7f8e236d1cd68d1e993f16e9ef31a36f392 Modified the charge numbers z1 and z2 Weiwei Ai 2025-10-21 Increase popsize https://staging.physiomeproject.org/workspace/cad/@@file/1b2bda84e78ccdccd92fe077ee4671a82f6fbae8 Increase popsize Weiwei Ai 2025-10-21 loose the bondaries https://staging.physiomeproject.org/workspace/cad/@@file/c4ef9e3faaa443cd73ccee57678ad383848902fa loose the bondaries Weiwei Ai 2025-10-20 Removed the parameter workers in opt algorithm https://staging.physiomeproject.org/workspace/cad/@@file/aa44a3392943a0fe94327bedf557570a0dc1e80d Removed the parameter workers in opt algorithm Weiwei Ai 2025-10-20 Add sedmls for 4-state SS models https://staging.physiomeproject.org/workspace/cad/@@file/a64287c4f09aafaedfae1de3fee45489d5e8e2a2 Add sedmls for 4-state SS models Weiwei Ai 2025-10-20 Add 4-state ss model; modified the t declaration for fixedV version of models https://staging.physiomeproject.org/workspace/cad/@@file/42590253ea0bfe74574871530c3fe67fdfada0a4 Add 4-state ss model; modified the t declaration for fixedV version of models Weiwei Ai 2025-10-20 fixed units issue https://staging.physiomeproject.org/workspace/cad/@@file/41bc748cdab499386ca1d4798f38d5accec73d76 fixed units issue Weiwei Ai 2025-10-16 Add 4-state pe https://staging.physiomeproject.org/workspace/cad/@@file/8da213ebb885378e52a379a02629bc7eadd994cb Add 4-state pe Weiwei Ai 2025-10-16 Add free version of 4-state model https://staging.physiomeproject.org/workspace/cad/@@file/775a27556ef4eb2613909a04ce1b33e69f47e1ce Add free version of 4-state model Weiwei Ai 2025-10-16 Add 4-state model https://staging.physiomeproject.org/workspace/cad/@@file/48deb02e3ac9e545f1508a080fbd79e3b032701b Add 4-state model Weiwei Ai 2025-10-16 fixed the volume scaling errors in the param constraints https://staging.physiomeproject.org/workspace/cad/@@file/8bc7461ed73f9b6def1cdd15b3f9277273ac94bc fixed the volume scaling errors in the param constraints Weiwei Ai 2025-10-09 Add sedml files for 6-state models to generate fitting data https://staging.physiomeproject.org/workspace/cad/@@file/b5b858bae719396506d8c36388b7ec2a0cc6783f Add sedml files for 6-state models to generate fitting data Weiwei Ai 2025-10-09 Modified the range of params https://staging.physiomeproject.org/workspace/cad/@@file/cec792223346c450b522ee50c5053261f3980383 Modified the range of params Weiwei Ai 2025-10-07 Add v2 pe https://staging.physiomeproject.org/workspace/cad/@@file/bc93f6dcbd5facf40bac77920a20fd27036eb5b3 Add v2 pe Weiwei Ai 2025-10-07 Add the first round pe results https://staging.physiomeproject.org/workspace/cad/@@file/4d720aaaedd4d36c8c684f55265e0f70bea036e9 Add the first round pe results Weiwei Ai 2025-10-07