- Author:
- 0Huitzil <frcastaneda@protonmail.com>
- Date:
- 2025-09-16 15:02:12+12:00
- Desc:
- Updated provenance file
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/d43/rawfile/1d47f4b1081aa6a90fc71e27b7274f047dbe25b3/OrganScaffold-settings.json
{
"general_settings": {},
"id": "scaffold creator settings",
"metadata": {
"annotations": [
{
"id": "",
"name": "core"
},
{
"id": "UBERON:0000044",
"name": "dorsal root ganglion"
},
{
"id": "UBERON:0002261",
"name": "dorsal root of spinal cord"
},
{
"id": "",
"name": "shell"
},
{
"id": "UBERON:0001780",
"name": "spinal nerve"
},
{
"id": "UBERON:0002260",
"name": "ventral root of spinal cord"
}
]
},
"scaffold_settings": {
"deleteElementRanges": "",
"scaffoldPackage": {
"_ScaffoldPackage": true,
"rotation": [
0.0,
0.0,
0.0
],
"scaffoldSettings": {
"Base parameter set": "Human 1",
"Number of elements across core box minor": 2,
"Number of elements across core transition": 1,
"Number of elements along dorsal root beside DRG": 1,
"Number of elements along dorsal root ganglion": 3,
"Number of elements along nerve root": 3,
"Number of elements along ventral root": 5,
"Number of elements around spinal nerve": 8,
"Number of elements through shell": 1,
"Show trim surfaces": false,
"Spinal nerve network layout": {
"_ScaffoldPackage": true,
"rotation": [
0.0,
0.0,
0.0
],
"scaffoldSettings": {
"Base parameter set": "Human 1",
"Define inner coordinates": true,
"Distance between bifurcation to spinal cord": 0.1,
"Dorsal root diameter": 0.1,
"Dorsal root ganglion thickest diameter": 0.18,
"Inner proportion default": 0.75,
"Pitch angle degrees": 10.0,
"Spinal cord major diameter": 1.5,
"Spinal cord minor diameter": 0.5,
"Spinal nerve root diameter": 0.1,
"Spinal nerve root length": 0.5,
"Structure": "1-2.1,2.2-3-4-5,2.3-6-7, 7-8-9-10-11, 11-12-13",
"Ventral root diameter": 0.1
},
"scaffoldTypeName": "1D Human Spinal Nerve Network Layout 1",
"scale": [
1.0,
1.0,
1.0
],
"translation": [
0.0,
0.0,
0.0
]
},
"Use Core": true
},
"scaffoldTypeName": "3D Spinal Nerve 1",
"scale": [
1.0,
1.0,
1.0
],
"translation": [
0.0,
0.0,
0.0
]
}
},
"segmentation_data_settings": {},
"version": "1.0.0"
}
