Location: BG Epithelial Transport @ 60305998c833 / epithelial-model.rst

Author:
David Nickerson <david.nickerson@gmail.com>
Date:
2025-08-26 17:11:41+12:00
Desc:
Adding some preliminary docs preparing for an initial exposure. Also adding files required for very basic web simulation to enable some testing.
Permanent Source URI:
https://staging.physiomeproject.org/workspace/d5e/rawfile/60305998c833cf8dd4d0d924d155693c331815ec/epithelial-model.rst

Base epithelial cell model
==========================

This is the CellML model encoding the base epithelial cell model, as shown in the figure below.
The **Views Available** menu to the right provide various views to explore this model.
Of particular interest are the *Mathematics* view showing all the mathematical equations in the model, and the *Generated Code* view which shows the available procedural code implementations generated from this CellML model.
The *Launch in OpenCOR* view will load a pre-configured simulation experiment into the `OpenCOR <https://opencor.ws>`_ desktop application.

.. figure::  model-diagram.png
   :width: 80%
   :align: center
   :alt: Schematic of the bond graph epithelial cell model.

   This figure depicts the bond graph epithelial cell model.