- Author:
- David Nickerson <david.nickerson@gmail.com>
- Date:
- 2025-08-26 17:11:41+12:00
- Desc:
- Adding some preliminary docs preparing for an initial exposure.
Also adding files required for very basic web simulation to enable some testing.
- Permanent Source URI:
- https://staging.physiomeproject.org/workspace/d5e/rawfile/60305998c833cf8dd4d0d924d155693c331815ec/simulation.json
{
"input": [
{
"defaultValue": 2000,
"id": "kappa_K",
"name": "κ_K (C/J/s)",
"maximumValue": 5000,
"minimumValue": 10
},
{
"defaultValue": 100,
"id": "kappa_NKCC1",
"name": "κ_NKCC1 (mmol/s)",
"maximumValue": 1000,
"minimumValue": 1
},
{
"defaultValue": 100,
"id": "kappa_KCC1",
"name": "κ_KCC1 (mmol/s)",
"maximumValue": 1000,
"minimumValue": 1
}
],
"output": {
"data": [
{
"id": "t",
"name": "main/t"
},
{
"id": "c_Na_epi",
"name": "main/c_Na_epi"
},
{
"id": "c_Glc_epi",
"name": "main/c_Glc_epi"
},
{
"id": "v_GLUT2",
"name": "main/v_GLUT2"
},
{
"id": "v_SGLT1",
"name": "main/v_SGLT1"
}
],
"plots": [
{
"yAxisTitle": "[Na]epi (mM)",
"yValue": "c_Na_epi",
"xAxisTitle": "Time (s)",
"xValue": "t"
},
{
"yAxisTitle": "[Glc]epi (mM)",
"yValue": "c_Glc_epi",
"xAxisTitle": "Time (s)",
"xValue": "t"
},
{
"yAxisTitle": "v_GLUT2 (mol/s)",
"yValue": "v_GLUT2",
"xAxisTitle": "Time (s)",
"xValue": "t"
},
{
"yAxisTitle": "v_SGLT1 (mol/s)",
"yValue": "v_SGLT1",
"xAxisTitle": "Time (s)",
"xValue": "t"
}
]
},
"parameters": [
{
"name": "main/kappa_K",
"value": "kappa_K"
},
{
"name": "main/kappa_NKCC1",
"value": "kappa_NKCC1 / 1000"
},
{
"name": "main/kappa_KCC1",
"value": "kappa_KCC1 / 1000"
}
]
}
