Model Mathematics

Component: environment

Component: Vm_n

ddtimeVm_n=0.001⁢-i_NaT+i_NaP+i_leakNa+i_KDR+i_KA+i_leakK+i_leakf+i_NaKATPase_n+i_appCm i_app=4500iftime≥t0∧time≦t10otherwise

Component: i_NaT

i_NaT=gNaT⁢m3⁢h⁢Vm_n-ENa_n J_NaT=gNaT⁢m3⁢h⁢Vm_n-ENa_nF

Component: i_NaT_m_gate

alpha_m=0.32⁢-Vm_n-51.9ⅇ-0.25⁢Vm_n+12.975-1 beta_m=0.28⁢Vm_n+24.89ⅇ0.2⁢Vm_n+4.978-1 ddtimem=alpha_m⁢1-m-beta_m⁢m

Component: i_NaT_h_gate

alpha_h=0.128⁢ⅇ-0.056⁢Vm_n+2.94 beta_h=4ⅇ-0.2⁢Vm_n+6+1 ddtimeh=alpha_h⁢1-h-beta_h⁢h

Component: i_NaP

i_NaP=gNaP⁢m2⁢h⁢Vm_n-ENa_n J_NaP=gNaP⁢m2⁢h⁢Vm_n-ENa_nF

Component: i_NaP_m_gate

alpha_m=1tau_activation⁢1ⅇ-0.143⁢Vm_n+5.67+1 beta_m=1tau_activation⁢ⅇ-0.143⁢Vm_n+5.67ⅇ-0.143⁢Vm_n+5.67+1 ddtimem=alpha_m⁢1-m-beta_m⁢m

Component: i_NaP_h_gate

alpha_h=5.12e-8⁢ⅇ-0.056⁢Vm_n+2.94 beta_h=1.6e-6ⅇ-0.2⁢Vm_n+8+1 ddtimeh=alpha_h⁢1-h-beta_h⁢h

Component: i_KDR

i_KDR=gKDR⁢n2⁢Vm_n-EK_n J_KDR=gKDR⁢n2⁢Vm_n-EK_nF

Component: i_KDR_n_gate

alpha_n=0.016⁢-Vm_n-34.9ⅇ-0.2⁢Vm_n+6.98-1 beta_n=0.25⁢ⅇ-0.025⁢Vm_n+1.25 ddtimen=alpha_n⁢1-n-beta_n⁢n

Component: i_KA

i_KA=gKA⁢m2⁢h⁢Vm_n-EK_n J_KA=gKA⁢m2⁢h⁢Vm_n-EK_nF

Component: i_KA_m_gate

alpha_m=0.02⁢-Vm_n-56.9ⅇ-0.1⁢Vm_n+5.69-1 beta_m=0.0175⁢Vm_n+29.9ⅇ0.1⁢Vm_n+2.99-1 ddtimem=alpha_m⁢1-m-beta_m⁢m

Component: i_KA_h_gate

alpha_h=0.016⁢ⅇ-0.056⁢Vm_n+4.61 beta_h=0.5ⅇ-0.2⁢Vm_n+11.98+1 ddtimeh=alpha_h⁢1-h-beta_h⁢h

Component: i_NaKATPase_n

i_NaKATPase_n=J_NaKATPase_n⁢F J_NaKATPase_n=I_NaKATPase_n_max⁢Nan1.5Nan1.5+KmNa1.5⁢KoKo+KmK

Component: i_leakNa

i_leakNa=gleakNa⁢Vm_n-ENa_n J_leakNa=gleakNa⁢Vm_n-ENa_nF

Component: i_leakK

i_leakK=gleakK⁢Vm_n-EK_n J_leakK=gleakK⁢Vm_n-EK_nF

Component: i_leakf

i_leakf=gleakf⁢Vm_n-Ef_n

Component: Vm_g

Vm_g=gNa⁢ENa_g+gK⁢EK_g+gCl⁢ECl_g+gNBC⁢ENBC_ggNa+gK+gCl+gNBC-F⁢J_NaKATPase_ggNa+gK+gCl+gNBC

Component: J_Na

J_Na=gNa⁢Vm_g-ENa_gF

Component: J_K

J_K=gK⁢Vm_g-EK_gF

Component: J_NaKATPase_g

J_NaKATPase_g=I_NaKATPase_g_max⁢Nag1.5Nag1.5+KmNa1.5⁢KoKo+KmK

Component: J_NBC

J_NBC=gNBC⁢Vm_g-ENBC_gF

Component: J_NKCC1

J_NKCC1=Ko-P_Ko10Ko-P_Ko10+0.0310⁢Psi⁢gNKCC1⁢ln⁡KoKg⁢NaoNag⁢CloClg2FifKo>P_Ko0otherwise

Component: N_Nag

ddtimeN_Nag=dN_Nag_dt dN_Nag_dt=0.01⁢-J_Na-3⁢J_NaKATPase_g+J_NKCC1+J_NBC

Component: N_Kg

ddtimeN_Kg=dN_Kg_dt dN_Kg_dt=0.01⁢-J_K+2⁢J_NaKATPase_g+J_NKCC1

Component: wg

ddtimewg=10⁢Lp⁢Nag+Kg+Clg+HCO3g+Xgwg-Nao+Ko+Clo+HCO3o

Component: wo

wo=P_wg+P_wo-wg

Component: N_Nao

ddtimeN_Nao=0.01⁢3⁢J_NaKATPase_n+J_NaT+J_NaP+J_leakNa-100⁢dN_Nag_dt

Component: N_Ko

ddtimeN_Ko=-0.01⁢J_NaT+J_NaP+J_leakNa+3⁢J_NaKATPase_n-dN_Kg_dt

Component: N_HCO3o

ddtimeN_HCO3o=-0.01⁢2⁢J_NBC

Component: electric_potentials

ENa_n=Psi⁢ln⁡NaoNan EK_n=Psi⁢ln⁡KoKn ENa_g=Psi⁢ln⁡NaoNag EK_g=Psi⁢ln⁡KoKg ECl_g=-1⁢Psi⁢ln⁡CloClg ENBC_g=-Psi⁢ln⁡NaoNag⁢HCO3oHCO3g2

Component: ion_concentrations

P_Clo=P_Nao+P_Ko-P_HCO3o P_HCO3g=P_HCO3o⁢P_NaoP_Nag⁢ⅇP_Vm_gPsi P_Clg=P_Clo⁢ⅇP_Vm_gPsi Kg=N_Kgwg Ko=N_Kowo Kn=P_wn⁢P_Kn+P_wg⁢P_Kg+P_wo⁢P_Ko-N_Ko+N_KgP_wn Nag=N_Nagwg Nao=N_Naowo Nan=P_wn⁢P_Nan+P_wg⁢P_Nag+P_wo⁢P_Nao-N_Nao+N_NagP_wn Clg=Nag+Kg-HCO3g+rho⁢Xgwg Cln=P_Cln+Nan-P_Nan+Kn-P_Kn Clo=P_wg⁢P_Clg+P_wo⁢P_Clo+P_wn⁢P_Cln-wg⁢Clg+P_wn⁢Clnwo HCO3o=N_HCO3owo HCO3g=P_wg⁢P_HCO3g+P_wo⁢P_HCO3o-N_HCO3owg

Component: model_parameters

Psi=1000⁢R⁢TF