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Model Mathematics

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Component: environment

Component: kinetic_constants

Component: PB

\frac{d}{d time} (PB) = k11_PC1 + k71 PF1 + kreset1 PG1 + k12_PC2 + k72 PF2 - (k11 A1 PB + k12 A2 PB)

Component: A1

\frac{d}{d time} (A1) = k11_PC1 - (k11 A1 PB)

Component: A2

\frac{d}{d time} (A2) = k12_PC2 - (k12 A2 PB)

Component: PC1

\frac{d}{d time} (PC1) = (k11 A1 PB - ((k11_+ k21) PC1)) + k21_PD1

Component: PD1

\frac{d}{d time} (PD1) = k21 PC1 - ((k21_+ k31) PD1)

Component: PE1

\frac{d}{d time} (PE1) = k31 PD1 - (k41 PE1)

Component: PF1

\frac{d}{d time} (PF1) = k41 PE1 - ((k51 + k71) PF1)

Component: PG1

\frac{d}{d time} (PG1) = k51 PF1 - (kreset1 PG1)

Component: PC2

\frac{d}{d time} (PC2) = (k12 A2 PB - ((k12_+ k22) PC2)) + k22_PD2

Component: PD2

\frac{d}{d time} (PD2) = k22 PC2 - ((k22_+ k32) PD2)

Component: PE2

Component: PF2

\frac{d}{d time} (PF2) = k42 PE2 - ((k52 + k72) PF2)

Component: kreset1

Source: Derived from workspace Heyd, Drew, 2003 at changeset c8e84a2b0236.

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A mathematical model for elongation of a peptide chain