Model Mathematics

Component: environment

Component: membrane

ddtimeV=-IK+ICa+IKCa+IKATPCm IK=gK⁢n⁢V-VK IKCa=gKCa1+kdc2⁢V-VK ICa=gCa⁢minf⁢V-VCa minf=11+ⅇ-20+V12 ninf=11+ⅇ-16+V5 ddtimen=ninf-ntaun

Component: calcium_handling

ddtimec=fcyt⁢Jmem+Jer ddtimecer=-fer⁢sigmaV⁢Jer Jserca=Kserca⁢c Jleak=pleak⁢cer-c Jer=epser⁢Jleak-Jsercalambdaer Jmem=-alpha⁢ICa+kpmca⁢c

Component: glycolysis

f6p=0.3⁢g6p rgpdh=0.2⁢fbp1 ddtimefbp=lambda⁢pfk1-0.5⁢rgpdh ddtimeg6p=lambda⁢Rgk⁢1-pfk1

Component: pfk

pfk=1⁢pfkbas⁢cat⁢topa16+cat⁢topbbottom16 weight2=atp2k4⁢1 topa2=topa1 bottom2=bottom1+weight2 weight3=f6p2k3⁢1 topa3=topa2+weight3 bottom3=bottom2+weight3 weight4=f6p⁢atp2fatp⁢k3⁢k4⁢12 topa4=topa3+weight4 bottom4=bottom3+weight4 weight5=fbpk2 topa5=topa4 bottom5=bottom4+weight5 weight6=fbp⁢atp2k2⁢k4⁢fbt⁢1 topa6=topa5 bottom6=bottom5+weight6 weight7=fbp⁢f6p2k2⁢k3⁢ffbp⁢1 topa7=topa6+weight7 bottom7=bottom6+weight7 weight8=fbp⁢f6p2⁢atp2k2⁢k3⁢k4⁢ffbp⁢fbt⁢fatp⁢12 topa8=topa7+weight8 bottom8=bottom7+weight8 weight9=ampk1 topa9=topa8 bottom9=bottom8+weight9 weight10=amp⁢atp2k1⁢k4⁢fmt⁢1 topa10=topa9 bottom10=bottom9+weight10 weight11=amp⁢f6p2k1⁢k3⁢famp⁢1 topa11=topa10+weight11 bottom11=bottom10+weight11 weight12=amp⁢f6p2⁢atp2k1⁢k3⁢k4⁢famp⁢fmt⁢fatp⁢12 topa12=topa11+weight12 bottom12=bottom11+weight12 weight13=amp⁢fbpk1⁢k2 topa13=topa12 bottom13=bottom12+weight13 weight14=amp⁢fbp⁢atp2k1⁢k2⁢k4⁢fbt⁢fmt⁢1 topa14=topa13 bottom14=bottom13+weight14 weight15=amp⁢fbp⁢f6p2k1⁢k2⁢k3⁢ffbp⁢famp⁢1 topa15=topa14 bottom15=bottom14+weight15 topb=weight15 weight16=amp⁢fbp⁢f6p2⁢atp2k1⁢k2⁢k3⁢k4⁢ffbp⁢famp⁢fbt⁢fmt⁢fatp⁢12 topa16=topa15+weight16 bottom16=bottom15+weight16

Component: KATP

mgadp=0.165⁢adp adp3m=0.135⁢adp atp4m=0.05⁢atp topo=0.08⁢1+2⁢mgadpkdd⁢1+0.89⁢mgadpkdd⁢12 bottomo=1+mgadpkdd⁢12⁢1+adp3mktd⁢1+atp4mktt⁢1 katpo=topobottomo IKATP=gkatpbar⁢katpo⁢V-VK

Component: nucleotides

ddtimeadp=atp-adp⁢ⅇfback⁢1-cr1taua⁢1 fback=r+y y=vg⁢rgpdhkg+rgpdh atp=0.5⁢atot-adp+rad⁢1 amp=adp⁢adpatp ratio=atpadp rad=adp-atot2-4⁢adp21