Shortlog

Date Author Log Options Exposure
2022-02-18 Shelley Fong Updating way cellml is written [files] [tgz] [zip]
2022-01-20 Shelley Fong formatting 2 [files] [tgz] [zip]
2022-01-19 Shelley Fong formatting [files] [tgz] [zip] BG_cAMP
2022-01-14 Shelley Fong fleshed rst [files] [tgz] [zip]
2022-01-14 Shelley Fong fleshed rst [files] [tgz] [zip]
2022-01-14 Shelley Fong updating rst [files] [tgz] [zip]
2022-01-14 Shelley Fong updating rst [files] [tgz] [zip]
2022-01-14 Shelley Fong updating rst [files] [tgz] [zip]
2022-01-14 Shelley Fong init [files] [tgz] [zip]
2021-12-03 Shelley Fong Updating names of GsaGTP and GiaGTP [files] [tgz] [zip]
2021-11-26 Shelley Fong Updating Knames [files] [tgz] [zip]
2021-11-17 Shelley Fong Using sympy for rational nullspace [files] [tgz] [zip]
2021-11-16 Shelley Fong Finding rational nullspace [files] [tgz] [zip]
2021-11-02 Shelley Fong Automating more [files] [tgz] [zip]
2021-10-29 Shelley Fong consolidating with local changes [files] [tgz] [zip]
2021-10-28 Shelley Fong Renaming kinetic_parameters.py [files] [tgz] [zip]
2021-10-27 Shelley Fong Renaming Kname [files] [tgz] [zip]
2021-10-27 Shelley Fong Renaming Kname [files] [tgz] [zip]
2021-10-22 Shelley Fong Fixing bugs [files] [tgz] [zip]
2021-10-20 Shelley Fong Removing MATLAB files [files] [tgz] [zip]
2021-10-20 Shelley Fong Adding remaining python files or modifications [files] [tgz] [zip]
2021-10-19 Shelley Fong Renaming folder [files] [tgz] [zip]
2021-10-11 Shelley Fong Adding conservation of chemostat mass check in environment. Fixing ICs to have negligible enzyme complexes [files] [tgz] [zip]
2021-10-06 Shelley Fong Adding PPi [files] [tgz] [zip]
2021-10-04 Shelley Fong Adding pyrophosphate group [files] [tgz] [zip]
2021-09-24 Shelley Fong Fixing allowance for GiAC routine [files] [tgz] [zip]
2021-09-17 Shelley Fong Using common PMR repo for units_and_constants [files] [tgz] [zip]
2021-09-15 Shelley Fong removing kinetic files [files] [tgz] [zip]
2021-09-15 Shelley Fong Adding Gi inhibition to adenylyl cyclase to network [files] [tgz] [zip]
2021-09-15 Shelley Fong Joining a_GTP and GsT as the same thing [files] [tgz] [zip]
2021-09-15 Shelley Fong Updating name of a_GTP [files] [tgz] [zip]
2021-09-10 Shelley Fong updating cellml files [files] [tgz] [zip]
2021-09-10 Shelley Fong Adding units file [files] [tgz] [zip]
2021-09-07 Shelley Fong adding Pub: out [files] [tgz] [zip]
2021-09-06 Shelley Fong Bug fixes [files] [tgz] [zip]
2021-08-25 Shelley Fong Changing directory of main script [files] [tgz] [zip]
2021-08-25 Shelley Fong Adjusted solver settings for sedml [files] [tgz] [zip]
2021-08-25 Shelley Fong Adding volume arguments and changing dimensions of input kinetic parameters to uM (source literature) [files] [tgz] [zip]
2021-07-26 Shelley Fong using constants_BG.cellml import [files] [tgz] [zip]
2021-07-26 Shelley Fong Removing unnecessary file [files] [tgz] [zip]
2021-07-26 Shelley Fong Removing unnecessary file [files] [tgz] [zip]
2021-07-26 Shelley Fong Adding MATLAB script to call function to find kinetic parameters. One for each module. [files] [tgz] [zip]
2021-07-22 Shelley Fong Removing unnecessary files [files] [tgz] [zip]
2021-07-21 Shelley Fong Adding constraint of Gibbs free energy for PDE reaction [files] [tgz] [zip]
2021-07-07 Shelley Fong Renaming variables [files] [tgz] [zip]
2021-06-21 Shelley Fong Codes to reproduce Saucerman Figs 2 and 3a [files] [tgz] [zip]
2021-06-04 Shelley Fong New BG parameters [files] [tgz] [zip]
2021-05-31 Shelley Fong push [files] [tgz] [zip]
2021-05-31 Shelley Fong colourcode stoich matrix [files] [tgz] [zip]
2021-05-31 Shelley Fong increased guess of forward kinetic rate constant in all reactions [files] [tgz] [zip]